Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC007560.1-201ENST00000426912 237 ntBASIC1.23□□□□□ -2.21
SPENQ96T58 AC005297.2-201ENST00000450430 606 ntBASIC1.23□□□□□ -2.21
SPENQ96T58 RN7SKP265-201ENST00000516448 223 ntBASIC1.23□□□□□ -2.21
SPENQ96T58 DUXAP9-208ENST00000622815 614 ntBASIC1.23□□□□□ -2.21
SPENQ96T58 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SPENQ96T58 MIR222-201ENST00000384992 110 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.22□□□□□ -2.21
SPENQ96T58 AL445305.1-201ENST00000432577 575 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 DUXAP8-207ENST00000456786 622 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 RPL31P41-201ENST00000477967 372 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
SPENQ96T58 RPL23AP78-201ENST00000599928 470 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 AL590099.1-201ENST00000615276 138 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.22□□□□□ -2.21
SPENQ96T58 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SPENQ96T58 AL157827.1-201ENST00000447622 132 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 RNU6-1132P-201ENST00000459214 107 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 AC012640.5-201ENST00000623897 319 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
SPENQ96T58 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.22□□□□□ -2.21
SPENQ96T58 HMGB1P5-201ENST00000255320 642 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 SNORA67.6-201ENST00000391093 99 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 HMGN2P35-201ENST00000412164 270 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 ARF4P2-201ENST00000430209 526 ntBASIC1.22□□□□□ -2.21
SPENQ96T58 AC007256.1-201ENST00000392253 2765 ntBASIC1.21□□□□□ -2.21
SPENQ96T58 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.21□□□□□ -2.22
SPENQ96T58 RPL23AP62-201ENST00000463396 453 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.21□□□□□ -2.22
SPENQ96T58 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.21□□□□□ -2.22
SPENQ96T58 AC097504.2-201ENST00000608088 454 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 MIR6078-201ENST00000611069 100 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SPENQ96T58 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SPENQ96T58 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.21□□□□□ -2.22
SPENQ96T58 XIAPP3-201ENST00000312918 795 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 Y_RNA.294-201ENST00000364916 102 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.21□□□□□ -2.22
SPENQ96T58 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.21□□□□□ -2.22
SPENQ96T58 AC104115.2-201ENST00000523026 687 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.21□□□□□ -2.22
SPENQ96T58 MTND5P21-201ENST00000531961 522 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 AC084364.2-201ENST00000546924 395 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 MIR3618-201ENST00000580330 88 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 AC098657.3-201ENST00000620434 263 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 MIR216A-201ENST00000385063 110 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 RNU2-25P-201ENST00000411041 191 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 FABP5P3-201ENST00000437960 408 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 AL357520.1-201ENST00000441557 453 ntBASIC1.21□□□□□ -2.22
SPENQ96T58 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.21□□□□□ -2.22
SPENQ96T58 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SPENQ96T58 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.21□□□□□ -2.22
SPENQ96T58 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SPENQ96T58 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
SPENQ96T58 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.2□□□□□ -2.22
SPENQ96T58 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.2□□□□□ -2.22
SPENQ96T58 AL109741.2-201ENST00000455561 343 ntBASIC1.2□□□□□ -2.22
SPENQ96T58 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.2□□□□□ -2.22
SPENQ96T58 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.2□□□□□ -2.22
SPENQ96T58 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.2□□□□□ -2.22
SPENQ96T58 AL592494.3-201ENST00000609485 464 ntBASIC1.2□□□□□ -2.22
SPENQ96T58 U3.15-201ENST00000365398 212 ntBASIC1.2□□□□□ -2.22
SPENQ96T58 U8.9-201ENST00000365667 134 ntBASIC1.2□□□□□ -2.22
SPENQ96T58 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.2□□□□□ -2.22
SPENQ96T58 CYCSP48-201ENST00000417124 323 ntBASIC1.2□□□□□ -2.22
SPENQ96T58 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.2□□□□□ -2.22
SPENQ96T58 RPS27AP18-201ENST00000515536 459 ntBASIC1.2□□□□□ -2.22
SPENQ96T58 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.2□□□□□ -2.22
SPENQ96T58 CYP3A137P-201ENST00000562436 69 ntBASIC1.2□□□□□ -2.22
SPENQ96T58 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.2□□□□□ -2.22
SPENQ96T58 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.2□□□□□ -2.22
SPENQ96T58 AL121917.1-203ENST00000605534 577 ntBASIC1.2□□□□□ -2.22
SPENQ96T58 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.2□□□□□ -2.22
SPENQ96T58 RPS15AP1-201ENST00000457423 391 ntBASIC1.2□□□□□ -2.22
SPENQ96T58 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.2□□□□□ -2.22
SPENQ96T58 AC000367.1-201ENST00000452711 1766 ntBASIC1.2□□□□□ -2.22
SPENQ96T58 RNA5SP363-201ENST00000365072 115 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.19□□□□□ -2.22
SPENQ96T58 RNU1-40P-201ENST00000516816 164 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 RNU1-97P-201ENST00000516872 164 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 AC036111.3-201ENST00000526389 112 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.19□□□□□ -2.22
SPENQ96T58 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.19□□□□□ -2.22
SPENQ96T58 VN1R79P-201ENST00000593540 513 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SPENQ96T58 VN1R108P-201ENST00000431580 830 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 RPS6P15-201ENST00000431996 751 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 NDUFS5P3-201ENST00000450668 321 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 IFNWP4-201ENST00000453148 294 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 AC108059.3-201ENST00000456388 214 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 MTND4P1-201ENST00000457501 1466 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 RNA5SP295-201ENST00000362655 121 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.19□□□□□ -2.22
SPENQ96T58 AC005912.1-201ENST00000495392 255 ntBASIC1.19□□□□□ -2.22
SPENQ96T58 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.19□□□□□ -2.22
SPENQ96T58 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.19□□□□□ -2.22
SPENQ96T58 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.19□□□□□ -2.22
SPENQ96T58 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.19□□□□□ -2.22
SPENQ96T58 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.19□□□□□ -2.22
SPENQ96T58 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms