Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 SDAD1P2-201ENST00000441308 2028 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC087359.1-201ENST00000508335 1740 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 RNU5A-1-201ENST00000362698 116 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 RNU6-1207P-201ENST00000384343 107 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 TPMTP3-201ENST00000411928 735 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 RPL7P8-201ENST00000411964 730 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 NDUFB4P7-201ENST00000423198 363 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AL356867.1-201ENST00000429623 299 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC107083.1-201ENST00000439643 279 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 RPS29P26-201ENST00000477483 171 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC021382.1-201ENST00000483523 359 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 RPL30P5-201ENST00000494923 336 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC097462.2-201ENST00000504623 481 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 ARL4AP2-201ENST00000507378 601 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC011471.1-201ENST00000585766 187 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC245884.10-201ENST00000597355 337 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC078899.3-201ENST00000599065 212 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC090186.1-201ENST00000605991 572 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC024933.1-201ENST00000608472 348 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC004067.1-201ENST00000608733 700 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AP003122.6-201ENST00000623831 495 ntBASIC3.14□□□□□ -1.91
ZNF560Q96MR9 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ZNF560Q96MR9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AC012321.1-201ENST00000561622 1588 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AC233263.6-201ENST00000631132 1963 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 RNU6-1078P-201ENST00000364522 103 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AL356421.1-201ENST00000403255 413 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 RN7SKP123-201ENST00000410732 291 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 RN7SKP58-201ENST00000411010 305 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 COTL1P1-201ENST00000422309 375 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AC104332.2-201ENST00000429959 156 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 OR4K11P-201ENST00000431829 904 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AL162389.1-201ENST00000449233 177 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 USP9YP25-201ENST00000457708 443 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AC104090.1-201ENST00000506341 1171 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 RNA5SP216-201ENST00000516111 123 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 RN7SKP43-201ENST00000516173 320 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 CASP1P1-201ENST00000526345 212 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AC010653.1-201ENST00000571108 881 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 LARP7P3-201ENST00000579888 337 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 VN1R92P-201ENST00000598511 928 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AL596327.1-201ENST00000603629 213 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AC106791.2-201ENST00000604680 391 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AC112220.3-201ENST00000605502 502 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AC009974.1-201ENST00000608881 455 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AC022960.3-201ENST00000619794 441 ntBASIC3.13□□□□□ -1.91
ZNF560Q96MR9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF560Q96MR9 AP000526.1-201ENST00000603308 1388 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 RNU5E-8P-201ENST00000363502 116 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 RNU6-7-201ENST00000364784 107 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 RNU6-8-201ENST00000365467 107 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 SNORA36C-201ENST00000384289 132 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC018630.2-202ENST00000422992 927 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 BX119904.4-201ENST00000424402 301 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 MTND3P1-201ENST00000441336 220 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 EEF1E1P1-201ENST00000446998 430 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 SETP11-201ENST00000473027 690 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC006445.2-201ENST00000510061 472 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 RNU6-798P-201ENST00000516912 103 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms