Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 FRG1BP-201ENST00000278882 761 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 RNU4-82P-201ENST00000362443 140 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
C9orf72Q96LT7 RPL7P37-201ENST00000425095 738 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.57□□□□□ -2
C9orf72Q96LT7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.57□□□□□ -2
C9orf72Q96LT7 AC005297.2-201ENST00000450430 606 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 snoU13.28-201ENST00000459235 104 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 AP000852.1-201ENST00000472460 573 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.57□□□□□ -2
C9orf72Q96LT7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.57□□□□□ -2
C9orf72Q96LT7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.57□□□□□ -2
C9orf72Q96LT7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 RNU6-798P-201ENST00000516912 103 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 AC243972.3-201ENST00000539655 198 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.57□□□□□ -2
C9orf72Q96LT7 MIR3921-201ENST00000577308 85 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 TPMTP1-201ENST00000592307 737 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 AL583856.2-201ENST00000606298 543 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 AC140725.3-201ENST00000616193 880 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
C9orf72Q96LT7 AC011330.2-201ENST00000621680 635 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 AC004009.2-201ENST00000623016 728 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 IGHVIII-44-202ENST00000636235 289 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
C9orf72Q96LT7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
C9orf72Q96LT7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
C9orf72Q96LT7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.56□□□□□ -2
C9orf72Q96LT7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
C9orf72Q96LT7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
C9orf72Q96LT7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
C9orf72Q96LT7 AL359693.1-201ENST00000614959 2407 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
C9orf72Q96LT7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.56□□□□□ -2
C9orf72Q96LT7 SNORD62.1-201ENST00000362541 86 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 RNA5SP68-201ENST00000363885 119 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.56□□□□□ -2
C9orf72Q96LT7 RNU6-198P-201ENST00000384258 104 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.56□□□□□ -2
C9orf72Q96LT7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.56□□□□□ -2
C9orf72Q96LT7 AC234781.2-201ENST00000426370 994 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 AC093155.1-201ENST00000440164 826 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 SUMO2P2-201ENST00000456482 255 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
C9orf72Q96LT7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
C9orf72Q96LT7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.56□□□□□ -2
C9orf72Q96LT7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.56□□□□□ -2
C9orf72Q96LT7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.56□□□□□ -2
C9orf72Q96LT7 AC138915.2-201ENST00000569776 97 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 DUXAP11-201ENST00000603858 526 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.56□□□□□ -2
C9orf72Q96LT7 AL161734.1-201ENST00000609720 557 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 MIR6817-201ENST00000615588 66 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 AC103798.2-201ENST00000624292 632 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 AC079597.1-201ENST00000624306 508 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.56□□□□□ -2
C9orf72Q96LT7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.56□□□□□ -2
C9orf72Q96LT7 AC087821.2-201ENST00000637086 450 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 CRYM-AS1-204ENST00000637983 556 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.56□□□□□ -2
C9orf72Q96LT7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
C9orf72Q96LT7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.56□□□□□ -2
C9orf72Q96LT7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
C9orf72Q96LT7 MAPK10-266ENST00000641066 6555 ntBASIC2.56□□□□□ -2
C9orf72Q96LT7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.56□□□□□ -2
C9orf72Q96LT7 AC080100.1-201ENST00000624239 5356 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
C9orf72Q96LT7 U3.12-201ENST00000364498 214 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
C9orf72Q96LT7 MIR627-201ENST00000384979 97 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.55□□□□□ -2
C9orf72Q96LT7 AL139039.1-201ENST00000401900 692 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 AL356131.1-201ENST00000405826 414 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 MIR1290-201ENST00000408735 78 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 BTF3P8-201ENST00000414577 526 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 LUZP4P1-201ENST00000415420 344 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 MTCO2P17-201ENST00000424336 677 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 SUMO1P4-201ENST00000429430 302 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 AL590233.1-201ENST00000430017 456 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 MTND2P5-201ENST00000432656 1006 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
C9orf72Q96LT7 SEPT7P5-201ENST00000434048 306 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.55□□□□□ -2
C9orf72Q96LT7 RPL26P6-201ENST00000440913 438 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.55□□□□□ -2
C9orf72Q96LT7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.55□□□□□ -2
C9orf72Q96LT7 ZNF519P1-201ENST00000449011 1626 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.55□□□□□ -2
C9orf72Q96LT7 AC244505.3-201ENST00000454598 187 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 RPS3P1-201ENST00000456781 192 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 Z99496.1-201ENST00000469424 1477 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 RPL30P5-201ENST00000494923 336 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.55□□□□□ -2
C9orf72Q96LT7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.55□□□□□ -2
C9orf72Q96LT7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.55□□□□□ -2
C9orf72Q96LT7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.55□□□□□ -2
C9orf72Q96LT7 AC017037.2-201ENST00000513850 890 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 RNU5A-7P-201ENST00000515979 116 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms