Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 APOOP4-201ENST00000513530 597 ntBASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 OR5G4P-201ENST00000525251 760 ntBASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 GLUD1P4-201ENST00000590914 418 ntBASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 WISP1-OT1-201ENST00000602893 642 ntBASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 AC090186.1-201ENST00000605991 572 ntBASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 AL355365.1-201ENST00000616480 294 ntBASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 PCMTD1P7-201ENST00000634506 357 ntBASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 AC092447.10-201ENST00000620607 1652 ntBASIC3.24□□□□□ -1.89
PDLIM5Q96HC4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 RNU1-70P-201ENST00000362618 164 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 MIR134-201ENST00000385258 73 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 RNA5SP252-201ENST00000391131 119 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AL021407.1-201ENST00000404531 386 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 RNA5SP229-201ENST00000410809 99 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 HMGN1P24-201ENST00000412282 298 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC016907.1-201ENST00000419483 435 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC245291.1-201ENST00000419501 328 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC083875.1-201ENST00000419509 405 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC008850.1-201ENST00000427546 362 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 KATNBL1P3-201ENST00000443475 909 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 RNU6-420P-201ENST00000458780 107 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 RPL30P9-201ENST00000465586 330 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC034236.1-201ENST00000469891 373 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 SETP11-201ENST00000473027 690 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AL049874.1-201ENST00000489560 388 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC093281.2-201ENST00000510153 597 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 SAP18P1-201ENST00000512058 390 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 SNORA64.4-201ENST00000516632 81 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 RNU6-798P-201ENST00000516912 103 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 RNU6-840P-201ENST00000517275 65 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC023632.4-201ENST00000517783 191 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC068657.1-201ENST00000520807 306 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AP000867.2-201ENST00000532468 320 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 SETP2-201ENST00000553886 926 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC034105.4-201ENST00000568304 277 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC005951.1-201ENST00000576706 485 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 Z83843.1-201ENST00000604070 3685 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 U3.45-201ENST00000607547 219 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AL031667.3-201ENST00000620124 655 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC091931.1-201ENST00000623488 728 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC034229.5-201ENST00000624258 185 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC007494.3-201ENST00000624660 743 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 AC079228.1-201ENST00000624774 1049 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 DDX10P1-201ENST00000448545 1933 ntBASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM5Q96HC4 ELL2P3-201ENST00000457883 1602 ntBASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 U3.11-201ENST00000364476 212 ntBASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 RNU6-343P-201ENST00000364709 104 ntBASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 MIR320C1-201ENST00000408566 88 ntBASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 RNU6-920P-201ENST00000410926 92 ntBASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 MTND1P21-201ENST00000412991 285 ntBASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 HSFY4P-201ENST00000415994 1181 ntBASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 SEPT2P1-201ENST00000419651 180 ntBASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 HMGN2P31-201ENST00000432430 273 ntBASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.22□□□□□ -1.89
PDLIM5Q96HC4 AC108734.1-201ENST00000439549 399 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms