Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 RNU6-451P-201ENST00000362921 107 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 RNU6-797P-201ENST00000363101 109 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 RNU2-36P-201ENST00000410361 191 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC108032.1-201ENST00000416706 207 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 MTND4P25-201ENST00000441039 533 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 SNRPEP8-201ENST00000442866 260 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC008481.1-201ENST00000463278 396 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC114786.4-201ENST00000508771 728 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 PCBP2P3-201ENST00000509726 843 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 ADI1P3-201ENST00000549509 470 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC007224.1-201ENST00000564410 144 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 MIR3160-1-201ENST00000577972 85 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC015917.1-201ENST00000579654 510 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 MIR4293-201ENST00000584305 78 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 UBE2V2P2-201ENST00000587677 504 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AF038458.1-201ENST00000588406 262 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC104662.1-201ENST00000604448 511 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AC023043.4-201ENST00000612081 449 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AL450472.3-201ENST00000615578 367 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 U6.114-201ENST00000636407 96 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 AL133412.1-201ENST00000380194 2992 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 RNU6-960P-201ENST00000364056 120 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 RN7SKP227-201ENST00000364445 330 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 RNU6-1009P-201ENST00000390996 107 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AL022722.2-201ENST00000402519 180 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 RNA5SP317-201ENST00000410176 116 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 RNA5SP311-201ENST00000411290 116 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 MTATP6P16-201ENST00000434543 526 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 RPL36AP6-201ENST00000435770 321 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 MTCO3P45-201ENST00000443036 613 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 GMFBP1-201ENST00000467831 427 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AP000852.1-201ENST00000472460 573 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AC233702.1-201ENST00000482905 502 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 RPL29P14-201ENST00000495837 428 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 RNA5SP315-201ENST00000516340 116 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 RNU6-1092P-201ENST00000516955 87 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 RNA5SP312-201ENST00000517068 116 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 IGKV2-38-201ENST00000517443 247 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 DEFB109D-201ENST00000529497 240 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AC022968.1-201ENST00000567372 442 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AL670379.6-201ENST00000603753 252 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AL670379.11-201ENST00000604059 253 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AC008162.1-201ENST00000604718 254 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AL670379.1-201ENST00000604752 252 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AL670379.5-201ENST00000605253 252 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AL670379.12-201ENST00000605291 253 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AL670379.8-201ENST00000605353 252 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AL591034.3-201ENST00000605511 685 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AL670379.7-201ENST00000605823 252 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 uc_338.11-201ENST00000619132 160 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms