Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 TPT1P12-201ENST00000448968 492 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 AC002545.1-201ENST00000592511 181 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 OR10AB1P-201ENST00000609613 938 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 SNHG22-203ENST00000617833 660 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 CR383658.2-201ENST00000547576 1525 ntBASIC3.27□□□□□ -1.89
VPS33AQ96AX1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS33AQ96AX1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 NDUFB4P5-201ENST00000415445 361 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AC011233.1-201ENST00000422812 283 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 MTND4P20-201ENST00000424125 869 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 TRIM60P18-201ENST00000441518 828 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 PIGFP3-201ENST00000441918 722 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 H2AFZP6-201ENST00000444403 394 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AC020550.1-201ENST00000447385 163 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AC008264.1-201ENST00000447612 367 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 LARP1BP2-201ENST00000486594 519 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 DEFB108A-201ENST00000530110 222 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 LRRC34P1-201ENST00000542742 915 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AC093012.1-202ENST00000549403 582 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AC034105.3-201ENST00000565294 442 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 NUTF2P8-201ENST00000604593 363 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AC018638.7-201ENST00000605836 1114 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AL355472.4-201ENST00000610233 626 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 MIR7844-201ENST00000616161 122 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 MTND1P37-201ENST00000636562 264 ntBASIC3.26□□□□□ -1.89
VPS33AQ96AX1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS33AQ96AX1 AC092435.3-201ENST00000565538 3654 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 RNU6-501P-201ENST00000364072 100 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 RNU6-270P-201ENST00000364131 105 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 CD24P4-201ENST00000382840 243 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 RNU6-198P-201ENST00000384258 104 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 CCNG1P1-201ENST00000406783 885 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AC078974.1-201ENST00000411597 223 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AC016769.2-201ENST00000414815 475 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AC005005.2-201ENST00000420779 380 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AL389915.1-201ENST00000422463 466 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 MTND5P25-201ENST00000430499 799 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 ISCA1P2-201ENST00000438679 421 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 MTCO1P42-201ENST00000457379 726 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AC091179.1-201ENST00000461606 579 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AC010631.1-201ENST00000474150 156 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 MTCYBP35-201ENST00000503630 1137 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 RNU6-928P-201ENST00000516876 104 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AC123904.3-201ENST00000547218 814 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 PARP1P2-201ENST00000556806 195 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AC090616.2-202ENST00000584248 222 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AL355816.2-201ENST00000610049 647 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AP000770.2-201ENST00000623694 100 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 AC073308.1-201ENST00000623696 305 ntBASIC3.25□□□□□ -1.89
VPS33AQ96AX1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS33AQ96AX1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 Y_RNA.46-201ENST00000362695 102 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 RNA5SP197-201ENST00000363357 119 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 RNA5SP139-201ENST00000364340 117 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 RNU6-1027P-201ENST00000383998 107 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 RNU6-217P-201ENST00000384164 104 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms