Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPL18P10-201ENST00000425606 538 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AL732292.1-201ENST00000426692 226 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.65□□□□□ -1.67
ERCC4Q92889 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.65□□□□□ -1.67
ERCC4Q92889 CBWD4P-201ENST00000445695 655 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.65□□□□□ -1.67
ERCC4Q92889 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.65□□□□□ -1.67
ERCC4Q92889 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.65□□□□□ -1.67
ERCC4Q92889 AL163973.1-201ENST00000484753 577 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AC093278.1-201ENST00000494700 600 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 RPL31P61-201ENST00000496160 376 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.65□□□□□ -1.67
ERCC4Q92889 RPL38P4-201ENST00000502376 214 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.65□□□□□ -1.67
ERCC4Q92889 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.65□□□□□ -1.67
ERCC4Q92889 MIR2114-201ENST00000516645 80 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 IGKV2-38-201ENST00000517443 247 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.65□□□□□ -1.67
ERCC4Q92889 AC009643.1-201ENST00000532030 391 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.65□□□□□ -1.67
ERCC4Q92889 AL360157.1-201ENST00000565962 87 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 RPS3AP23-202ENST00000574601 686 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AC022655.2-201ENST00000577280 318 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.65□□□□□ -1.67
ERCC4Q92889 AC244505.7-201ENST00000599675 272 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 LLPHP1-201ENST00000603571 367 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AL356218.2-201ENST00000605264 187 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AC004908.2-201ENST00000609090 574 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 MIR378J-201ENST00000611988 109 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.65□□□□□ -1.67
ERCC4Q92889 AL354950.2-201ENST00000617939 290 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AC007742.2-201ENST00000618226 398 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AL713922.2-201ENST00000619384 716 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.65□□□□□ -1.67
ERCC4Q92889 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ERCC4Q92889 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
ERCC4Q92889 RIOK3P1-201ENST00000418778 1528 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
ERCC4Q92889 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ERCC4Q92889 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 AC139713.2-214ENST00000642059 1811 ntBASIC4.65□□□□□ -1.67
ERCC4Q92889 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ERCC4Q92889 HSPE1P11-201ENST00000339579 310 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 RNU5E-8P-201ENST00000363502 116 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 RNA5SP447-201ENST00000363749 119 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ERCC4Q92889 XGY1-201ENST00000381172 446 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 RNU6-1011P-201ENST00000384668 107 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
ERCC4Q92889 U3.22-201ENST00000391120 215 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 AL591416.1-201ENST00000404015 867 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 SNORA3C-201ENST00000408792 125 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 HMGN1P24-201ENST00000412282 298 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AC007390.1-201ENST00000415722 356 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 RPS12P23-201ENST00000419579 400 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.64□□□□□ -1.67
ERCC4Q92889 CHIAP3-201ENST00000423668 1133 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC4Q92889 RPS29P17-201ENST00000430795 166 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 AC011998.1-201ENST00000433403 117 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.64□□□□□ -1.67
ERCC4Q92889 RPS17P13-201ENST00000448974 407 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.64□□□□□ -1.67
ERCC4Q92889 RNU7-59P-201ENST00000459101 61 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 AL049714.1-201ENST00000466686 347 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 GMFBP1-201ENST00000467831 427 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.64□□□□□ -1.67
ERCC4Q92889 TMEM248P1-201ENST00000510579 951 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC4Q92889 SUB1P1-201ENST00000524415 382 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 AC011979.2-201ENST00000527568 352 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AP000857.1-201ENST00000532151 543 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AL133153.1-201ENST00000557756 303 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC4Q92889 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC4Q92889 AC044792.1-201ENST00000593294 196 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 AL355812.1-201ENST00000603215 216 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 HMGB1P50-201ENST00000605814 607 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 AC040168.1-201ENST00000623594 991 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.64□□□□□ -1.67
ERCC4Q92889 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.64□□□□□ -1.67
ERCC4Q92889 MTND5P17-201ENST00000418405 1603 ntBASIC4.64□□□□□ -1.67
ERCC4Q92889 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.64□□□□□ -1.67
ERCC4Q92889 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.64□□□□□ -1.67
ERCC4Q92889 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ERCC4Q92889 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.63□□□□□ -1.67
ERCC4Q92889 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.63□□□□□ -1.67
ERCC4Q92889 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms