Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RPS6P12-201ENST00000432491 726 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 DPPA3P1-201ENST00000448050 469 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 MTND5P20-201ENST00000448677 143 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.81□□□□□ -1.64
RTF1Q92541 AC055855.1-201ENST00000489563 579 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 AC079382.1-201ENST00000493346 557 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 AC069439.1-201ENST00000494739 167 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.81□□□□□ -1.64
RTF1Q92541 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.81□□□□□ -1.64
RTF1Q92541 AP003497.1-201ENST00000528472 562 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.81□□□□□ -1.64
RTF1Q92541 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.81□□□□□ -1.64
RTF1Q92541 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.81□□□□□ -1.64
RTF1Q92541 MIR3167-201ENST00000579623 85 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 MIR3944-201ENST00000581277 108 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTF1Q92541 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.81□□□□□ -1.64
RTF1Q92541 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.81□□□□□ -1.64
RTF1Q92541 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTF1Q92541 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RTF1Q92541 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.81□□□□□ -1.64
RTF1Q92541 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RTF1Q92541 BDP1P-201ENST00000582658 1990 ntBASIC4.81□□□□□ -1.64
RTF1Q92541 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
RTF1Q92541 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.8□□□□□ -1.64
RTF1Q92541 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTF1Q92541 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTF1Q92541 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RTF1Q92541 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTF1Q92541 SNORA72.1-201ENST00000363485 129 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 Y_RNA.295-201ENST00000364918 102 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 MIR218-2-201ENST00000385006 110 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTF1Q92541 U3.29-201ENST00000391296 212 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTF1Q92541 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.8□□□□□ -1.64
RTF1Q92541 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.8□□□□□ -1.64
RTF1Q92541 AC119618.1-201ENST00000434191 222 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.8□□□□□ -1.64
RTF1Q92541 HMGB3P21-201ENST00000452483 547 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 AC104308.1-201ENST00000454621 333 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 RPS4XP10-201ENST00000465034 731 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 AC069499.1-201ENST00000489433 509 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 RNU6-358P-201ENST00000516564 75 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 Y_RNA.702-201ENST00000516843 96 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 RANP9-201ENST00000519957 271 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 AC090281.1-201ENST00000523019 276 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.8□□□□□ -1.64
RTF1Q92541 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.8□□□□□ -1.64
RTF1Q92541 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.8□□□□□ -1.64
RTF1Q92541 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.8□□□□□ -1.64
RTF1Q92541 SUB1P2-201ENST00000556401 297 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.8□□□□□ -1.64
RTF1Q92541 AC060771.1-201ENST00000582031 164 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 AC068790.3-201ENST00000602988 553 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 YWHAQP7-201ENST00000603536 658 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 AC004853.1-201ENST00000604902 698 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 LARP7P1-201ENST00000605576 316 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 AL391813.2-201ENST00000609113 322 ntBASIC4.8□□□□□ -1.64
RTF1Q92541 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTF1Q92541 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.8□□□□□ -1.64
RTF1Q92541 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RTF1Q92541 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTF1Q92541 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTF1Q92541 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RTF1Q92541 AC090337.1-201ENST00000579651 2074 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 Y_RNA.159-201ENST00000363674 87 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 RNU1-39P-201ENST00000383897 165 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 SNORA20.2-201ENST00000383922 131 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 RNU6-483P-201ENST00000384088 108 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTF1Q92541 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.79□□□□□ -1.64
RTF1Q92541 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.79□□□□□ -1.64
RTF1Q92541 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.79□□□□□ -1.64
RTF1Q92541 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.79□□□□□ -1.64
RTF1Q92541 AC010655.1-201ENST00000449336 292 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 AL353691.1-201ENST00000451332 387 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTF1Q92541 COX7A2P2-201ENST00000505291 250 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 AC110768.1-201ENST00000509222 400 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.79□□□□□ -1.64
RTF1Q92541 Y_RNA.704-201ENST00000516851 102 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 SNORA20.3-201ENST00000516880 132 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 MTND1P35-201ENST00000526739 508 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 AP001646.1-201ENST00000527936 915 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.79□□□□□ -1.64
RTF1Q92541 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTF1Q92541 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.79□□□□□ -1.64
RTF1Q92541 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.79□□□□□ -1.64
RTF1Q92541 MIR3146-201ENST00000580367 79 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 MIR3922-201ENST00000585192 84 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.79□□□□□ -1.64
RTF1Q92541 AL009028.1-201ENST00000604895 802 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 AC069200.1-201ENST00000609511 323 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 AC069234.5-201ENST00000611056 416 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 AC012314.7-201ENST00000619693 93 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 MIR4496-201ENST00000635896 61 ntBASIC4.79□□□□□ -1.64
RTF1Q92541 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTF1Q92541 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms