Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC007991.1-201ENST00000522680 631 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AP003072.2-201ENST00000527756 676 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AP000857.1-201ENST00000532151 543 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC006254.3-201ENST00000603353 884 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 IGHV3-29-201ENST00000604817 344 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 TUG1_1.1-201ENST00000610654 145 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC022306.2-201ENST00000617563 647 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 MIR8057-201ENST00000620957 69 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC099654.14-201ENST00000638599 341 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC138915.3-201ENST00000562908 1389 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 OR1S2-201ENST00000302592 978 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 RNU6-1322P-201ENST00000364309 107 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 RNU6-169P-201ENST00000365336 107 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 RNU6-516P-201ENST00000411381 104 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AC092447.6-201ENST00000414578 210 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 CCDC58P2-201ENST00000417131 366 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 HMGB3P20-201ENST00000417997 600 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AL137014.1-201ENST00000420490 1226 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 HMGB3P12-201ENST00000438745 556 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AC010655.1-201ENST00000449336 292 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AC140076.1-201ENST00000449897 361 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 snoU13.3-201ENST00000459441 104 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AL049714.1-201ENST00000466686 347 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 RPL29P14-201ENST00000495837 428 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AC025445.1-201ENST00000502728 300 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 RNA5SP179-201ENST00000517284 121 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AC008694.2-201ENST00000517591 306 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 OR4T1P-201ENST00000554933 911 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AL359212.1-201ENST00000556608 614 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AL158211.4-201ENST00000606988 584 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AP001330.5-201ENST00000607176 411 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AP002360.3-201ENST00000607673 710 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AC107294.1-201ENST00000609524 467 ntBASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMC1BQ8NDV3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 RNU6-1120P-201ENST00000362988 108 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 Y_RNA.159-201ENST00000363674 87 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 RNA5SP50-201ENST00000363731 107 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 Y_RNA.295-201ENST00000364918 102 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 RNU6-877P-201ENST00000383868 107 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 RNU1-39P-201ENST00000383897 165 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 RNU6-432P-201ENST00000384196 109 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 MIR921-201ENST00000401133 56 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 HSPD1P16-201ENST00000402302 394 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 OR1AA1P-201ENST00000419597 916 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 Z74021.1-201ENST00000423610 407 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 AL162388.1-201ENST00000450912 352 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 AC020893.1-201ENST00000502452 580 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 RNU6-1281P-201ENST00000516223 105 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 RNU6-410P-201ENST00000517006 107 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 MTND1P35-201ENST00000526739 508 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 AL133271.1-201ENST00000538229 291 ntBASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.75□□□□□ -1.65
SMC1BQ8NDV3 MTND6P33-201ENST00000571794 183 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms