Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 SCARNA24.1-201ENST00000516465 137 ntBASIC4.37□□□□□ -1.71
RNF169Q8NCN4 RNU7-143P-201ENST00000516781 65 ntBASIC4.37□□□□□ -1.71
RNF169Q8NCN4 RNA5SP179-201ENST00000517284 121 ntBASIC4.37□□□□□ -1.71
RNF169Q8NCN4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.37□□□□□ -1.71
RNF169Q8NCN4 OR5B19P-201ENST00000531766 928 ntBASIC4.37□□□□□ -1.71
RNF169Q8NCN4 ARL2BPP2-201ENST00000550907 489 ntBASIC4.37□□□□□ -1.71
RNF169Q8NCN4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.37□□□□□ -1.71
RNF169Q8NCN4 AC105224.1-201ENST00000587055 421 ntBASIC4.37□□□□□ -1.71
RNF169Q8NCN4 AC044792.1-201ENST00000593294 196 ntBASIC4.37□□□□□ -1.71
RNF169Q8NCN4 AC025946.2-201ENST00000603398 234 ntBASIC4.37□□□□□ -1.71
RNF169Q8NCN4 AC004853.1-201ENST00000604902 698 ntBASIC4.37□□□□□ -1.71
RNF169Q8NCN4 AC039056.2-201ENST00000622261 511 ntBASIC4.37□□□□□ -1.71
RNF169Q8NCN4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RNF169Q8NCN4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF169Q8NCN4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.37□□□□□ -1.71
RNF169Q8NCN4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RNF169Q8NCN4 AL356489.2-201ENST00000566968 3528 ntBASIC4.37□□□□□ -1.71
RNF169Q8NCN4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 RNU6-845P-201ENST00000362578 103 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 Y_RNA.142-201ENST00000363491 102 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 RNU5A-8P-201ENST00000364102 114 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 Y_RNA.548-201ENST00000384656 105 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 RNA5SP39-201ENST00000411245 120 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 RPL23AP30-201ENST00000432419 501 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 TIMM9P1-201ENST00000436122 256 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 UBE2V1P13-201ENST00000436983 439 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AL500522.2-201ENST00000448562 343 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 NANOGP10-201ENST00000453325 895 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 SNORD121B-201ENST00000458838 81 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 RN7SL323P-201ENST00000494712 295 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 SNORD27.1-201ENST00000516319 72 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 OR5AL2P-201ENST00000532185 920 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 OR5BN1P-201ENST00000532955 829 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 KC877982.1-201ENST00000602313 470 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AC091167.4-201ENST00000605079 184 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 FP236240.3-201ENST00000623061 327 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 AL159972.1-201ENST00000625150 448 ntBASIC4.36□□□□□ -1.71
RNF169Q8NCN4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
RNF169Q8NCN4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 RNA5SP124-201ENST00000362739 110 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 RNU4-73P-201ENST00000363164 141 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 RNU6-213P-201ENST00000384051 104 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 RNU6-767P-201ENST00000384132 107 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 RNU6-606P-201ENST00000384721 111 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 MIR19A-201ENST00000384878 82 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 MIR93-201ENST00000385024 80 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 RPS20P15-201ENST00000412792 311 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AC007390.1-201ENST00000415722 356 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 RPS15AP40-201ENST00000419621 391 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 SDCBPP3-201ENST00000419629 891 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 FTH1P1-201ENST00000437933 532 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AL353691.1-201ENST00000451332 387 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 IFNWP4-201ENST00000453148 294 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 RPS20P24-201ENST00000457473 361 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 TRMT10BP1-201ENST00000519377 943 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AC007566.2-201ENST00000603642 413 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AC115621.1-201ENST00000604653 858 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 MIR432-201ENST00000606207 94 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AL138713.1-201ENST00000624026 2130 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AC112487.2-201ENST00000637950 304 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF169Q8NCN4 AL592437.2-201ENST00000421655 2434 ntBASIC4.35□□□□□ -1.71
RNF169Q8NCN4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms