Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC126182.1-201ENST00000478134 357 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AC090453.1-201ENST00000495560 436 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 MLLT10P2-201ENST00000506434 249 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 HMGB1P28-201ENST00000507778 552 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AC113420.1-201ENST00000507903 571 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AC006445.2-201ENST00000510061 472 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 CDC42P4-201ENST00000510507 563 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 RNU6-276P-201ENST00000516114 96 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 HSPA8P13-201ENST00000523715 472 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AL390838.2-201ENST00000602394 274 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 U73023.1-201ENST00000603134 700 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 ZNF519P1-201ENST00000449011 1626 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 CUL1P1-201ENST00000509510 2425 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 SNORA80A-201ENST00000363922 136 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 MRPS36P1-201ENST00000421291 307 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AP000936.2-201ENST00000447151 681 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AL590664.1-201ENST00000448065 339 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AC069528.1-202ENST00000482888 637 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AC079203.1-201ENST00000487972 404 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 SRIP1-201ENST00000489235 288 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AC096571.1-202ENST00000506634 735 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 OR7K1P-201ENST00000546439 926 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AC123904.3-201ENST00000547218 814 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 YWHAZP1-201ENST00000556286 722 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 MIR5194-201ENST00000582634 120 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 MIR5092-201ENST00000583139 88 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AC015688.2-201ENST00000584523 262 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 VN1R92P-201ENST00000598511 928 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AC069431.2-201ENST00000604149 1099 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AL022099.1-201ENST00000604551 712 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AC106900.2-201ENST00000604994 317 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AC005014.3-201ENST00000605985 190 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 AL513185.3-201ENST00000433335 1300 ntBASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CCDC65Q8IXS2 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 CDR1-202ENST00000625883 1485 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 SNORD62.1-201ENST00000362541 86 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 Y_RNA.548-201ENST00000384656 105 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 RNU6-882P-201ENST00000391025 103 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AC019097.1-201ENST00000424783 735 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AC063976.3-201ENST00000426849 329 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 MTCYBP45-201ENST00000435243 565 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 NANOGP2-201ENST00000435391 727 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AC129850.1-201ENST00000436203 508 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 OR6K5P-201ENST00000447050 945 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 RPL18AP17-201ENST00000455326 198 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AC108734.3-201ENST00000481241 1165 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AC096576.1-201ENST00000489014 359 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 MTCYBP17-201ENST00000503579 789 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 VN1R104P-201ENST00000505115 1009 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AC113347.3-201ENST00000509113 148 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 RAC1P5-201ENST00000512182 576 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AC008837.2-201ENST00000513076 418 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 SLC2A13P1-201ENST00000531560 322 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AC024224.1-201ENST00000538284 609 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AL035413.2-201ENST00000604801 525 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 OR1S1-201ENST00000624470 978 ntBASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC65Q8IXS2 AC093536.2-201ENST00000565257 1406 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 AC090740.1-201ENST00000623193 2262 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms