Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AL133507.1-201ENST00000605269 557 ntBASIC3.32□□□□□ -1.88
CCDC83Q8IWF9 AL590099.1-201ENST00000615276 138 ntBASIC3.32□□□□□ -1.88
CCDC83Q8IWF9 AC068831.7-201ENST00000616954 363 ntBASIC3.32□□□□□ -1.88
CCDC83Q8IWF9 AP000484.1-201ENST00000620067 1252 ntBASIC3.32□□□□□ -1.88
CCDC83Q8IWF9 AC091046.2-201ENST00000620775 665 ntBASIC3.32□□□□□ -1.88
CCDC83Q8IWF9 AC011330.2-201ENST00000621680 635 ntBASIC3.32□□□□□ -1.88
CCDC83Q8IWF9 AC068787.1-201ENST00000623908 691 ntBASIC3.32□□□□□ -1.88
CCDC83Q8IWF9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC83Q8IWF9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CCDC83Q8IWF9 MTND5P7-201ENST00000413558 1798 ntBASIC3.32□□□□□ -1.88
CCDC83Q8IWF9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC83Q8IWF9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC83Q8IWF9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 MIR634-201ENST00000385208 97 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 RPL5P18-201ENST00000406671 891 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 RPL27AP8-201ENST00000424277 446 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC233728.2-201ENST00000425348 757 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 MTATP6P4-201ENST00000427725 675 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC024082.2-201ENST00000434771 238 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 SETP8-201ENST00000435341 628 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC112653.1-201ENST00000443851 386 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 VN1R104P-201ENST00000505115 1009 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC020699.1-201ENST00000505161 445 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC024589.1-201ENST00000512207 263 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC091826.1-201ENST00000514065 313 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AL133271.1-201ENST00000538229 291 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AL596327.1-201ENST00000603629 213 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AL158042.1-201ENST00000605338 460 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 MIR6130-201ENST00000619419 109 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 AC009487.2-201ENST00000420969 6821 ntBASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC83Q8IWF9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 DEFB108F-201ENST00000344638 222 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 RNU6-83P-201ENST00000384568 112 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AL138885.1-201ENST00000405921 675 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AL031121.1-201ENST00000406553 254 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 SNORD88.1-201ENST00000408684 91 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 SNRPEP4-201ENST00000435815 279 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 MTND1P31-201ENST00000449206 961 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 GMPSP1-201ENST00000514075 579 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 RNA5SP216-201ENST00000516111 123 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 RNA5SP341-201ENST00000516261 117 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 SNORA70.16-201ENST00000516390 95 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AP001804.3-201ENST00000525146 880 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AC022690.1-201ENST00000526681 550 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 DEFB108D-201ENST00000527787 222 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AP002404.1-201ENST00000532005 451 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 HPRT1P3-201ENST00000539521 576 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AC006504.3-201ENST00000586818 523 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 VN1R92P-201ENST00000598511 928 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AP002826.1-201ENST00000608835 315 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AC135507.2-201ENST00000612443 309 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AC006111.3-201ENST00000622137 383 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 MIR6733-201ENST00000635723 61 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AC092435.3-201ENST00000565538 3654 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 AC000403.1-201ENST00000613696 3585 ntBASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CCDC83Q8IWF9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC83Q8IWF9 RNU6-157P-201ENST00000383957 107 ntBASIC3.29□□□□□ -1.88
CCDC83Q8IWF9 MIR128-1-201ENST00000384921 82 ntBASIC3.29□□□□□ -1.88
CCDC83Q8IWF9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC83Q8IWF9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC83Q8IWF9 SNORA48.2-201ENST00000390926 124 ntBASIC3.29□□□□□ -1.88
CCDC83Q8IWF9 RPS3AP24-201ENST00000407896 734 ntBASIC3.29□□□□□ -1.88
CCDC83Q8IWF9 RNU6-757P-201ENST00000410334 100 ntBASIC3.29□□□□□ -1.88
CCDC83Q8IWF9 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.29□□□□□ -1.88
CCDC83Q8IWF9 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC83Q8IWF9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms