Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AC068276.1-201ENST00000605793 379 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AC092653.1-201ENST00000608509 531 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 GABRG2-229ENST00000641017 3628 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 FGF7P2-201ENST00000332473 296 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 MIR30B-201ENST00000384850 88 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 SNORA3.3-201ENST00000408712 125 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AC091390.3-201ENST00000426478 338 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AC129850.1-201ENST00000436203 508 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 RPL37P6-201ENST00000460682 294 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 RN7SL432P-201ENST00000484057 298 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 RNU2-10P-201ENST00000516375 211 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AC107934.1-201ENST00000522215 217 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AC087373.1-201ENST00000524920 491 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AP000867.2-201ENST00000532468 320 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AL121576.1-201ENST00000556055 276 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 PARP1P2-201ENST00000556806 195 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AL157394.1-201ENST00000562983 1224 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 KLKP1-201ENST00000595979 403 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 BNIP3P8-201ENST00000597863 560 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 SNORA51-201ENST00000606420 132 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 U7.8-201ENST00000619968 63 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AC091953.2-201ENST00000623979 160 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AC068057.2-201ENST00000624047 895 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 AL136313.1-201ENST00000624804 202 ntBASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00346Q8IVM7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 RNU6-511P-201ENST00000363496 107 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 SNORA70.2-201ENST00000364506 135 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 RNU1-101P-201ENST00000391171 127 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 AL391417.1-201ENST00000404100 426 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 AL021407.1-201ENST00000404531 386 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 SEPT2P1-201ENST00000419651 180 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 RAC1P6-201ENST00000423911 575 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 RPL21P40-201ENST00000428586 483 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 RPS29P7-201ENST00000439662 171 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 HMGB3P11-201ENST00000440127 604 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 TAF9P1-201ENST00000445421 515 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 TAF9P2-201ENST00000454958 515 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 snoU109.1-201ENST00000459339 135 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 RBM43P1-201ENST00000476891 1081 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 CYCSP30-201ENST00000546447 172 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 AC128657.1-201ENST00000549459 145 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 RPL21P5-201ENST00000554662 472 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 AC087499.8-201ENST00000578406 226 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 MIR3682-201ENST00000581338 84 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 MIR3118-1-201ENST00000581787 76 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 GLUD1P4-201ENST00000590914 418 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 AC025594.3-201ENST00000613068 790 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 AC005344.1-201ENST00000613391 459 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 AL354798.1-201ENST00000622505 329 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 AC099654.13-201ENST00000639774 207 ntBASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC00346Q8IVM7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms