Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 FABP5P5-201ENST00000515537 406 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.37□□□□□ -1.87
LDB1Q86U70 SNORA70.16-201ENST00000516390 95 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AC107934.2-201ENST00000518653 310 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.37□□□□□ -1.87
LDB1Q86U70 AC060788.1-201ENST00000521318 469 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AP001804.3-201ENST00000525146 880 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.37□□□□□ -1.87
LDB1Q86U70 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.37□□□□□ -1.87
LDB1Q86U70 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB1Q86U70 CCNG2P1-201ENST00000549521 1000 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AC005476.1-201ENST00000554427 397 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 ZNF519P3-201ENST00000557158 1032 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.37□□□□□ -1.87
LDB1Q86U70 AL133153.1-201ENST00000557756 303 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB1Q86U70 U73023.1-201ENST00000603134 700 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AC011468.4-201ENST00000603942 409 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AL359999.1-201ENST00000604513 294 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AC068276.1-201ENST00000605793 379 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 SNORA51-201ENST00000606420 132 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AC097065.2-201ENST00000608159 533 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AC004908.3-201ENST00000610248 625 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 RMST_8.1-201ENST00000610287 165 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AL592295.2-201ENST00000612578 206 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 TUG1_2.1-201ENST00000614234 87 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
LDB1Q86U70 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.37□□□□□ -1.87
LDB1Q86U70 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.37□□□□□ -1.87
LDB1Q86U70 MFSD8-233ENST00000641482 4860 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB1Q86U70 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB1Q86U70 RNU4-91P-201ENST00000364778 135 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 SNORA23-201ENST00000365128 182 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 AL109755.1-201ENST00000401791 649 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 AP000567.1-201ENST00000406413 156 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 MIR1290-201ENST00000408735 78 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 Y_RNA.608-201ENST00000410647 95 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 AC069157.1-201ENST00000421749 137 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 AL356583.2-201ENST00000426536 280 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB1Q86U70 RPL23AP82-202ENST00000427528 469 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 BX679664.1-201ENST00000434429 253 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 SETP8-201ENST00000435341 628 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 TXNP1-201ENST00000441872 371 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.36□□□□□ -1.87
LDB1Q86U70 AC008264.1-201ENST00000447612 367 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB1Q86U70 CENPBD1P1-201ENST00000464061 469 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 RN7SL330P-201ENST00000469709 307 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 RPS23P3-201ENST00000470993 430 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 RPS15AP36-201ENST00000492022 382 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.36□□□□□ -1.87
LDB1Q86U70 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB1Q86U70 AC022878.1-201ENST00000530684 149 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.36□□□□□ -1.87
LDB1Q86U70 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB1Q86U70 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.36□□□□□ -1.87
LDB1Q86U70 AL356432.3-201ENST00000568952 465 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.36□□□□□ -1.87
LDB1Q86U70 AP001981.2-201ENST00000603241 418 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 AC090970.3-201ENST00000612566 866 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 AC009878.1-201ENST00000621819 340 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 Z69908.1-201ENST00000622603 247 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 AC010149.2-201ENST00000637608 315 ntBASIC3.36□□□□□ -1.87
LDB1Q86U70 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LDB1Q86U70 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB1Q86U70 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB1Q86U70 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB1Q86U70 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LDB1Q86U70 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LDB1Q86U70 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC002546.1-201ENST00000588041 2504 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB1Q86U70 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB1Q86U70 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LDB1Q86U70 U3.4-201ENST00000363352 213 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.35□□□□□ -1.87
LDB1Q86U70 SNORD116-9-201ENST00000384000 95 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 SNORD116-3-201ENST00000384287 95 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 SNORA36C-201ENST00000384289 132 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 SNORD116-7-201ENST00000384404 95 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 SNORD116-5-201ENST00000384462 95 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 MIR449B-201ENST00000384995 97 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 MIR670-201ENST00000390142 98 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 RNU6-278P-201ENST00000390945 109 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.35□□□□□ -1.87
LDB1Q86U70 Y_RNA.598-201ENST00000410480 95 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 UBE2FP1-201ENST00000416536 447 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 AC018630.2-202ENST00000422992 927 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC092641.1-201ENST00000440229 772 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.35□□□□□ -1.87
LDB1Q86U70 SNRPGP9-201ENST00000456025 225 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms