Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC092809.3-201ENST00000415453 231 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 COX6B1P1-201ENST00000415962 213 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 RPL21P38-201ENST00000418090 167 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 OR2AM1P-201ENST00000422137 422 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 AL160275.3-201ENST00000423876 471 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 UBE2D3P2-201ENST00000424409 445 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 RPL23AP33-201ENST00000442301 452 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 RN7SL385P-201ENST00000468873 276 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 AC016065.2-201ENST00000514530 444 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 ERHP1-201ENST00000523006 310 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 OR1M4P-201ENST00000589199 287 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 AC010620.2-201ENST00000600135 313 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 MIR1244-1-201ENST00000612829 85 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 MIR1244-3-201ENST00000635744 85 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 MIR1244-2-201ENST00000636449 85 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 MIR1244-4-202ENST00000636813 85 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 MFSD8-216ENST00000641147 4009 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 AC093849.1-201ENST00000563631 2209 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 Y_RNA.352-201ENST00000365439 102 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 RNA5SP487-201ENST00000410186 122 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AL030996.1-201ENST00000411430 235 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC007098.1-201ENST00000420122 367 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC073063.1-201ENST00000434352 607 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 Z92846.1-201ENST00000456203 268 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 RN7SKP60-201ENST00000516985 239 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC008033.2-201ENST00000542626 177 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AL359219.2-201ENST00000555184 348 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC008814.1-201ENST00000603797 406 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC010900.2-201ENST00000604508 210 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC083809.1-201ENST00000615051 472 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SH3RF1Q7Z6J0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 RN7SKP113-201ENST00000363891 295 ntBASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 Y_RNA.200-201ENST00000364018 102 ntBASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 RNU6-1303P-201ENST00000364841 107 ntBASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 RN7SKP153-201ENST00000365026 316 ntBASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 RN7SKP16-201ENST00000410180 299 ntBASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 RNU6-1203P-201ENST00000410703 110 ntBASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 Y_RNA.793-201ENST00000411222 111 ntBASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 AC092423.1-201ENST00000430165 186 ntBASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 RNU6-953P-201ENST00000459154 107 ntBASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 AC110792.1-201ENST00000491826 472 ntBASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 AP006587.4-201ENST00000526053 529 ntBASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 AC126177.3-201ENST00000551839 688 ntBASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.92□□□□□ -1.46
SH3RF1Q7Z6J0 AC011487.3-201ENST00000593607 453 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms