Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU1-77P-201ENST00000390868 162 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 AL133388.1-201ENST00000404509 287 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 RNU6-735P-201ENST00000410612 107 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 RNA5SP494-201ENST00000410653 129 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 RN7SKP51-201ENST00000410781 304 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 DPPA2P2-201ENST00000418220 897 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 GSTM5P1-201ENST00000434751 660 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 AL360271.2-201ENST00000447710 161 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 AC133134.1-201ENST00000466800 359 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 SEPT14P8-201ENST00000508026 178 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 GSTP1P1-201ENST00000548078 319 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 RN7SL652P-201ENST00000577769 300 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 AC072026.1-201ENST00000605023 201 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 AC006329.2-201ENST00000611491 394 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 U6.92-201ENST00000636464 89 ntBASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LYSMD3Q7Z3D4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 RNA5SP335-201ENST00000363817 110 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 Y_RNA.304-201ENST00000365011 112 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 SNORA70.6-201ENST00000383934 134 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 RNU6-804P-201ENST00000384286 107 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC009804.1-201ENST00000400949 179 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 U3.35-201ENST00000408405 208 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 RPL31P2-201ENST00000413849 377 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC017079.2-201ENST00000416102 485 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC099677.1-201ENST00000420575 175 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 CFL1P1-202ENST00000432948 411 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC092573.2-201ENST00000434546 243 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AL354710.1-201ENST00000453641 246 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AL445433.1-201ENST00000457507 257 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC006499.3-201ENST00000506077 748 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 Y_RNA.662-201ENST00000516028 97 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AP004607.2-201ENST00000533949 322 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC010186.2-204ENST00000537668 439 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC007458.1-201ENST00000542812 373 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 FKBP1BP1-201ENST00000553366 325 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 LRRC37A5P-203ENST00000580181 585 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC073657.2-201ENST00000605661 303 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC100757.1-201ENST00000616872 1835 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AL121839.2-201ENST00000565058 6943 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 AC000374.1-201ENST00000434698 1745 ntBASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LYSMD3Q7Z3D4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 RNU6-1020P-201ENST00000363684 107 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 MIR578-201ENST00000384828 96 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 RNU4-34P-201ENST00000410431 124 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 Y_RNA.602-201ENST00000410535 92 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 RNU6-607P-201ENST00000411283 108 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 CYCSP33-201ENST00000414485 327 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 CYCSP6-201ENST00000434498 302 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 RPL12P18-201ENST00000437175 325 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 FHP1-201ENST00000442741 703 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms