Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC007537.2-201ENST00000472093 511 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC069499.1-201ENST00000489433 509 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC026427.2-201ENST00000506228 536 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC026801.2-201ENST00000515352 425 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 IGLVIV-65-201ENST00000517313 360 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC123904.3-201ENST00000547218 814 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC091135.1-201ENST00000585943 307 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AL034351.1-201ENST00000605288 668 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 DISC2.1-201ENST00000612827 205 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AL359314.1-201ENST00000616913 261 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC008013.2-202ENST00000637965 364 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AP001148.1-201ENST00000624124 2359 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 CBX3P1-201ENST00000325243 554 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 RNU6-600P-201ENST00000362524 99 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 Y_RNA.255-201ENST00000364581 97 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 RNU6-996P-201ENST00000365438 107 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AL354719.1-201ENST00000406535 843 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 SNORA11F-201ENST00000408237 128 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 RNU2-39P-201ENST00000410604 198 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 RPL21P24-201ENST00000413752 448 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AL356387.2-201ENST00000422272 243 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC012498.1-201ENST00000424037 437 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 RPL23AP1-201ENST00000428990 471 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC006466.1-201ENST00000438721 289 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC098614.3-201ENST00000438957 440 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AL356535.1-201ENST00000440335 398 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC126389.1-201ENST00000477436 290 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC091951.2-201ENST00000500762 203 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC114786.4-201ENST00000508771 728 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 CENPUP1-201ENST00000526649 1202 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC103843.2-201ENST00000530523 682 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC125611.2-201ENST00000551907 647 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC068831.4-201ENST00000556118 109 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AP001029.3-201ENST00000588063 596 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC020914.4-201ENST00000597690 277 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 XIAPP1-201ENST00000603162 600 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC113403.1-201ENST00000604910 193 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 BNIP3P10-201ENST00000605360 577 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 Mico1.1-201ENST00000611698 204 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 TUG1_2.1-201ENST00000614234 87 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC100827.5-201ENST00000615883 426 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 MIR6130-201ENST00000619419 109 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC243312.2-201ENST00000623340 601 ntBASIC3.82□□□□□ -1.8
PTCHD4Q6ZW05 AC093648.1-201ENST00000623546 606 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms