Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 Y_RNA.485-201ENST00000384395 102 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 MIR323B-201ENST00000385269 82 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 RNU1-77P-201ENST00000390868 162 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 SNORA68.2-201ENST00000391263 128 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AL080315.1-201ENST00000406055 466 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 MIR1271-201ENST00000408537 86 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AC063979.1-201ENST00000415539 377 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 RPL17P19-201ENST00000489069 552 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 RPS4XP20-201ENST00000505751 772 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AC008716.1-201ENST00000511084 513 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 RNA5SP464-201ENST00000516251 108 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 RNA5SP373-201ENST00000517271 95 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AP000827.1-201ENST00000527814 258 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AC009643.1-201ENST00000532030 391 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AC008814.1-201ENST00000603797 406 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AC062037.2-201ENST00000610137 73 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 AL161616.1-201ENST00000611867 286 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 U2.1-201ENST00000618978 145 ntBASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN4Q6PJG9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
LRFN4Q6PJG9 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
LRFN4Q6PJG9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 RNU6-379P-201ENST00000363813 104 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 RNA5SP132-201ENST00000364725 118 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 Y_RNA.314-201ENST00000365114 102 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AL445529.1-201ENST00000398713 389 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 HSPA8P15-201ENST00000401676 786 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 RNU6-174P-201ENST00000410406 106 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AL353621.1-201ENST00000418219 243 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 UBE2D3P2-201ENST00000424409 445 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 RPL7P2-201ENST00000427639 268 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 RPL26P6-201ENST00000440913 438 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 RPL23AP31-201ENST00000456160 467 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AL136038.1-201ENST00000497246 351 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AP005902.1-201ENST00000521358 186 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 HMGB1P40-201ENST00000525121 540 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AC022882.1-201ENST00000532142 501 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AC126177.5-201ENST00000549599 178 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AC114947.2-201ENST00000565748 2125 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 MIR4458-201ENST00000578872 75 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AC009812.4-201ENST00000569134 1805 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AL672167.1-204ENST00000641875 3017 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 AL592437.2-201ENST00000421655 2434 ntBASIC4.71□□□□□ -1.66
LRFN4Q6PJG9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.7□□□□□ -1.66
LRFN4Q6PJG9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN4Q6PJG9 SDAD1P2-201ENST00000441308 2028 ntBASIC4.7□□□□□ -1.66
LRFN4Q6PJG9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.7□□□□□ -1.66
LRFN4Q6PJG9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
LRFN4Q6PJG9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRFN4Q6PJG9 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN4Q6PJG9 AC104623.2-202ENST00000623477 4002 ntBASIC4.7□□□□□ -1.66
LRFN4Q6PJG9 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN4Q6PJG9 MIR323A-201ENST00000362199 86 ntBASIC4.7□□□□□ -1.66
LRFN4Q6PJG9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms