Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PWAR1-201ENST00000624188 2414 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-755P-201ENST00000364400 103 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 Y_RNA.324-201ENST00000365165 102 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 Y_RNA.331-201ENST00000365267 102 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 Y_RNA.405-201ENST00000383979 100 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 Y_RNA.451-201ENST00000384200 100 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 Y_RNA.524-201ENST00000384564 100 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 Y_RNA.561-201ENST00000384694 100 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 Y_RNA.563-201ENST00000384707 108 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 RNU11-201ENST00000387069 134 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-817P-201ENST00000391083 104 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 RPL23AP26-201ENST00000412728 464 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 UQCRBP2-201ENST00000447827 297 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AC079354.2-201ENST00000453523 154 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 U8.22-201ENST00000459141 133 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-953P-201ENST00000459154 107 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AC100832.1-201ENST00000471945 383 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 COPS8P2-201ENST00000473228 627 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 DUTP1-201ENST00000493631 470 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AC005912.1-201ENST00000495392 255 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-1234P-201ENST00000516877 103 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 RN7SL802P-201ENST00000577858 299 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AL360012.1-201ENST00000602813 131 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 MIR8080-201ENST00000622224 89 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AC008873.1-201ENST00000625051 138 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 CYP4F35P-202ENST00000636121 390 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AL445487.1-201ENST00000415694 1580 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC092079.1-201ENST00000558620 1985 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-818P-201ENST00000364837 108 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-14P-201ENST00000384630 106 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 MIR130A-201ENST00000385274 89 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 U3.29-201ENST00000391296 212 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 RNU5A-5P-201ENST00000411054 116 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC011742.1-201ENST00000431448 434 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC010733.1-201ENST00000451515 401 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC010683.1-201ENST00000473673 378 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 RPS4XP22-201ENST00000480755 780 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC108043.1-201ENST00000512696 574 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-612P-201ENST00000516909 102 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 IGLV2-28-201ENST00000520681 304 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AP004242.1-201ENST00000533701 349 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AK6P2-201ENST00000549020 471 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC126615.2-201ENST00000553003 515 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 RPL23AP78-201ENST00000599928 470 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC004852.3-201ENST00000614131 326 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC090607.5-201ENST00000615692 224 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 AC099506.2-201ENST00000623074 221 ntBASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.13□□□□□ -1.59
RNFT1Q5M7Z0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNFT1Q5M7Z0 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms