Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 CBX3P1-201ENST00000325243 554 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 RNU6-1120P-201ENST00000362988 108 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 RNU5A-8P-201ENST00000364102 114 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 RNU6-761P-201ENST00000384148 107 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 MIR19A-201ENST00000384878 82 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 RPS4XP8-201ENST00000402039 771 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 RNU2-47P-201ENST00000410649 186 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 ATP5HP2-201ENST00000433885 485 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 SEPT14P3-201ENST00000439401 183 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 AL732372.2-207ENST00000445840 183 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 AC140076.1-201ENST00000449897 361 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 SEPT14P2-201ENST00000453405 183 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 MTCO2P29-201ENST00000465212 189 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 SEPT14P4-201ENST00000513445 186 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 RNU6-875P-201ENST00000516488 106 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 AC090572.1-201ENST00000519251 160 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 FO082796.1-201ENST00000523795 183 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 OR4R3P-201ENST00000525084 838 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 AL133271.1-201ENST00000538229 291 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 COX6CP3-201ENST00000580869 223 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 AC008945.2-201ENST00000606056 604 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 MIR4727-201ENST00000622232 55 ntBASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC178Q5BJE1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 ZNF680P1-201ENST00000436625 1469 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 Y_RNA.86-201ENST00000363020 111 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 SNORA69-201ENST00000383895 132 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 RNU6-1009P-201ENST00000390996 107 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 RNU6-908P-201ENST00000410160 94 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 RNU4-78P-201ENST00000410940 126 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 OR9R1P-201ENST00000412200 877 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 MTCO3P12-201ENST00000416718 547 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 MTND4P28-201ENST00000426217 387 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC011742.1-201ENST00000431448 434 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 UBE2V1P7-201ENST00000446395 340 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AL049714.1-201ENST00000466686 347 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC006512.1-201ENST00000468816 291 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 RN7SL323P-201ENST00000494712 295 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC017037.2-201ENST00000513850 890 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 RNA5SP401-201ENST00000515920 127 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 SNORD116-26-201ENST00000516006 96 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 RNU6-410P-201ENST00000517006 107 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 RN7SKP234-201ENST00000517173 224 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 CENPUP1-201ENST00000526649 1202 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 MIR5685-201ENST00000579080 79 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 MIR4644-201ENST00000579929 84 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC067852.4-201ENST00000590314 478 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AL035413.2-201ENST00000604801 525 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC245517.5-201ENST00000611529 162 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 AC024614.3-201ENST00000637860 256 ntBASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC178Q5BJE1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC178Q5BJE1 UBE3AP2-201ENST00000429033 2259 ntBASIC4.55□□□□□ -1.68
CCDC178Q5BJE1 RNU6-989P-201ENST00000362756 107 ntBASIC4.55□□□□□ -1.68
CCDC178Q5BJE1 RNU6-223P-201ENST00000362830 107 ntBASIC4.55□□□□□ -1.68
CCDC178Q5BJE1 RNU6-39P-201ENST00000384344 107 ntBASIC4.55□□□□□ -1.68
CCDC178Q5BJE1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC178Q5BJE1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC178Q5BJE1 RNU6-278P-201ENST00000390945 109 ntBASIC4.55□□□□□ -1.68
CCDC178Q5BJE1 RNU6-1158P-201ENST00000391167 107 ntBASIC4.55□□□□□ -1.68
CCDC178Q5BJE1 HMGN1P24-201ENST00000412282 298 ntBASIC4.55□□□□□ -1.68
CCDC178Q5BJE1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC178Q5BJE1 ATP5JP1-201ENST00000431631 322 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms