Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MIR4308-201ENST00000580634 81 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 MIR5701-1-201ENST00000585138 82 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.771-201ENST00000598668 102 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 AC069307.1-201ENST00000602820 447 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 MIR5701-2-201ENST00000615634 82 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 AC109583.2-201ENST00000617367 129 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.789-201ENST00000622480 102 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 AL445487.1-201ENST00000415694 1580 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 PANDAR-201ENST00000629595 1506 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AP004607.3-201ENST00000530354 3915 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.71-201ENST00000362892 104 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 RNU6-818P-201ENST00000364837 108 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AC016397.1-201ENST00000412463 242 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AL591043.1-201ENST00000432461 424 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 TBCAP1-201ENST00000436520 327 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 HSPE1P25-201ENST00000455484 251 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 RN7SL197P-201ENST00000466981 299 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AC022034.3-201ENST00000471393 478 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 RNU6-941P-201ENST00000516346 108 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 IGLV3-24-201ENST00000517477 197 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 MIR4311-201ENST00000580794 100 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 MIR4697-201ENST00000582977 78 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AL670379.6-201ENST00000603753 252 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AL670379.1-201ENST00000604752 252 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AL670379.2-201ENST00000604983 252 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AL670379.5-201ENST00000605253 252 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AL670379.8-201ENST00000605353 252 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AC008962.1-201ENST00000605729 304 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AL670379.7-201ENST00000605823 252 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 RNU6-85P-201ENST00000605989 107 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AL022394.1-201ENST00000606979 292 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AL133481.2-203ENST00000607558 139 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 MIR378J-201ENST00000611988 109 ntBASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.84□□□□□ -1.47
CTC1Q2NKJ3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CTC1Q2NKJ3 AP001029.2-203ENST00000589795 4910 ntBASIC5.84□□□□□ -1.48
CTC1Q2NKJ3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AC114947.2-201ENST00000565748 2125 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 RNU4-44P-201ENST00000363050 141 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 SMIM11P1-201ENST00000369586 178 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 GLULP6-201ENST00000399502 913 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AL079342.1-201ENST00000401460 267 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AC096921.1-201ENST00000411661 375 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AC069218.2-201ENST00000411665 344 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AC245028.1-201ENST00000423259 256 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 MTCO1P5-201ENST00000433573 344 ntBASIC5.83□□□□□ -1.48
CTC1Q2NKJ3 AC005094.1-201ENST00000440420 368 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms