Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MTND2P5-201ENST00000432656 1006 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 MTCYBP11-201ENST00000447254 1109 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 UQCRHP3-201ENST00000451503 251 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 TRGVB-201ENST00000453257 471 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 RN7SL283P-201ENST00000489055 303 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 KLRA1P-201ENST00000503499 986 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC068657.1-201ENST00000520807 306 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 FAM60DP-201ENST00000524174 632 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC027176.1-201ENST00000560204 514 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AL512347.1-201ENST00000566420 503 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 GLUD1P4-201ENST00000590914 418 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 BNIP3P24-201ENST00000593398 557 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC079089.3-201ENST00000603094 673 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 RPL23AP92-201ENST00000603609 255 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC019159.1-201ENST00000605094 187 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC080013.3-201ENST00000606839 578 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC013412.1-201ENST00000610687 192 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 GABRG2-229ENST00000641017 3628 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 FAM35BP-202ENST00000497389 3337 ntBASIC3.24□□□□□ -1.89
SHROOM1Q2M3G4 AC011460.1-201ENST00000636268 1834 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 RNA5SP383-201ENST00000362934 120 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 MIR196B-201ENST00000384852 84 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AC009963.1-201ENST00000417265 157 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AC112220.1-201ENST00000434628 355 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 RPL21P134-201ENST00000453468 483 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 USP9YP34-201ENST00000453983 808 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 RPL18AP17-201ENST00000455326 198 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AC026410.2-201ENST00000460281 156 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 RNU6-583P-201ENST00000516012 92 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 OR7K1P-201ENST00000546439 926 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 MIR4637-201ENST00000582405 84 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 MIR4506-201ENST00000584693 77 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AC091057.2-201ENST00000602594 792 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AC069304.2-201ENST00000605154 435 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AP000240.1-201ENST00000609910 452 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 AC231657.1-201ENST00000624313 397 ntBASIC3.23□□□□□ -1.89
SHROOM1Q2M3G4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 MIR148B-201ENST00000362252 99 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 SNORA26.7-201ENST00000391288 122 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 RNU2-47P-201ENST00000410649 186 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 RNA5SP21-201ENST00000410917 96 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 MYL8P-204ENST00000431574 518 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 MTND4LP10-201ENST00000435146 291 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 SETP8-201ENST00000435341 628 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 RPL23AP22-201ENST00000437556 453 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 RPL23AP58-201ENST00000440453 469 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 AC023424.2-201ENST00000493479 777 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 AC009901.1-201ENST00000506703 541 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 AC107016.2-201ENST00000547968 190 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 NUTF2P8-201ENST00000604593 363 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 AC002064.3-201ENST00000623448 346 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 AC093908.1-201ENST00000623125 8092 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 AC093831.2-201ENST00000624393 3427 ntBASIC3.22□□□□□ -1.89
SHROOM1Q2M3G4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 RNU6-859P-201ENST00000362728 107 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 RNU4-92P-201ENST00000363783 136 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms