Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 RNU1-42P-201ENST00000364033 160 ntBASIC2.13□□□□□ -2.07
CPSF1Q10570 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.13□□□□□ -2.07
CPSF1Q10570 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.13□□□□□ -2.07
CPSF1Q10570 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.13□□□□□ -2.07
CPSF1Q10570 SNRPGP9-201ENST00000456025 225 ntBASIC2.13□□□□□ -2.07
CPSF1Q10570 SNRPFP4-201ENST00000456366 242 ntBASIC2.13□□□□□ -2.07
CPSF1Q10570 RPL23AP55-201ENST00000498163 452 ntBASIC2.13□□□□□ -2.07
CPSF1Q10570 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.13□□□□□ -2.07
CPSF1Q10570 MTCO1P47-201ENST00000523889 1271 ntBASIC2.13□□□□□ -2.07
CPSF1Q10570 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.13□□□□□ -2.07
CPSF1Q10570 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.13□□□□□ -2.07
CPSF1Q10570 AC012493.3-201ENST00000604494 112 ntBASIC2.13□□□□□ -2.07
CPSF1Q10570 AC106028.5-201ENST00000610332 395 ntBASIC2.13□□□□□ -2.07
CPSF1Q10570 AC103710.2-202ENST00000641454 2853 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 MIR1276-201ENST00000408707 83 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 AC241520.1-201ENST00000422654 1099 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF1Q10570 IPO7P1-201ENST00000442031 636 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 ARL5AP2-201ENST00000444698 533 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.12□□□□□ -2.07
CPSF1Q10570 AC022493.1-201ENST00000492984 337 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 CDC42P4-201ENST00000510507 563 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 AC025423.2-201ENST00000537570 439 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 AL161670.1-201ENST00000554348 137 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 NBEAP1-201ENST00000554452 979 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 AC015720.1-201ENST00000565251 277 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 AL133507.1-201ENST00000605269 557 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 AC068831.7-201ENST00000616954 363 ntBASIC2.12□□□□□ -2.07
CPSF1Q10570 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CPSF1Q10570 Y_RNA.327-201ENST00000365201 102 ntBASIC2.11□□□□□ -2.07
CPSF1Q10570 MIR518E-201ENST00000385252 88 ntBASIC2.11□□□□□ -2.07
CPSF1Q10570 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.11□□□□□ -2.07
CPSF1Q10570 AC234782.4-201ENST00000417646 1048 ntBASIC2.11□□□□□ -2.07
CPSF1Q10570 RNU1-61P-201ENST00000516107 151 ntBASIC2.11□□□□□ -2.07
CPSF1Q10570 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF1Q10570 MIR4421-201ENST00000578133 69 ntBASIC2.11□□□□□ -2.07
CPSF1Q10570 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF1Q10570 AC084373.1-201ENST00000603311 235 ntBASIC2.11□□□□□ -2.07
CPSF1Q10570 MIR489-201ENST00000384923 84 ntBASIC2.1□□□□□ -2.07
CPSF1Q10570 RNU6-1077P-201ENST00000410506 102 ntBASIC2.1□□□□□ -2.07
CPSF1Q10570 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF1Q10570 PAICSP7-201ENST00000419829 962 ntBASIC2.1□□□□□ -2.07
CPSF1Q10570 AC244098.2-201ENST00000422068 99 ntBASIC2.1□□□□□ -2.07
CPSF1Q10570 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CPSF1Q10570 AC009474.2-201ENST00000451383 136 ntBASIC2.1□□□□□ -2.07
CPSF1Q10570 LARP7P4-201ENST00000481075 878 ntBASIC2.1□□□□□ -2.07
CPSF1Q10570 RPS15AP36-201ENST00000492022 382 ntBASIC2.1□□□□□ -2.07
CPSF1Q10570 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF1Q10570 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.1□□□□□ -2.07
CPSF1Q10570 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
CPSF1Q10570 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.1□□□□□ -2.07
CPSF1Q10570 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF1Q10570 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF1Q10570 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF1Q10570 RMST_6.1-201ENST00000611980 203 ntBASIC2.1□□□□□ -2.07
CPSF1Q10570 AC008083.4-201ENST00000615076 444 ntBASIC2.1□□□□□ -2.07
CPSF1Q10570 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CPSF1Q10570 SNORA81-201ENST00000408493 178 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF1Q10570 MTCYBP7-201ENST00000419540 1134 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 ELOCP11-201ENST00000436690 332 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 RPL23AP33-201ENST00000442301 452 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 AC124916.1-201ENST00000444020 547 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 ELOCP16-201ENST00000444494 332 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 MTCO1P42-201ENST00000457379 726 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 HMGN1P8-201ENST00000463578 288 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF1Q10570 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF1Q10570 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CPSF1Q10570 AL138976.2-201ENST00000563989 694 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 SNRPGP15-201ENST00000600149 222 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 AC068944.2-201ENST00000610373 403 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 AL031601.2-202ENST00000622650 282 ntBASIC2.09□□□□□ -2.07
CPSF1Q10570 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.09□□□□□ -2.07
CPSF1Q10570 AC073055.1-201ENST00000456901 1621 ntBASIC2.09□□□□□ -2.08
CPSF1Q10570 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CPSF1Q10570 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.08□□□□□ -2.08
CPSF1Q10570 MIR517C-201ENST00000385103 95 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 AL035405.1-201ENST00000400795 710 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.08□□□□□ -2.08
CPSF1Q10570 NDUFA5P4-201ENST00000436704 385 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.08□□□□□ -2.08
CPSF1Q10570 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.08□□□□□ -2.08
CPSF1Q10570 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.08□□□□□ -2.08
CPSF1Q10570 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.08□□□□□ -2.08
CPSF1Q10570 AC234775.1-201ENST00000454247 670 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 PPP1R2P5-201ENST00000457256 603 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 AP002371.1-201ENST00000463604 433 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF1Q10570 RNA5SP471-201ENST00000516971 106 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.08□□□□□ -2.08
CPSF1Q10570 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.08□□□□□ -2.08
CPSF1Q10570 AC113194.1-201ENST00000606037 500 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CPSF1Q10570 BX649567.1-201ENST00000642071 1134 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CPSF1Q10570 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms