Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.33□□□□□ -1.88
CDK3Q00526 RPL31P3-201ENST00000458430 332 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 RPL23AP67-201ENST00000465341 474 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.33□□□□□ -1.88
CDK3Q00526 AC020893.1-201ENST00000502452 580 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.33□□□□□ -1.88
CDK3Q00526 AC117522.2-201ENST00000510049 657 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 AC109464.2-201ENST00000510242 943 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 APOOP4-201ENST00000513530 597 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.33□□□□□ -1.88
CDK3Q00526 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.33□□□□□ -1.88
CDK3Q00526 FABP5P5-201ENST00000515537 406 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 SNORA31.22-201ENST00000517204 135 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 ERHP1-201ENST00000523006 310 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.33□□□□□ -1.88
CDK3Q00526 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.33□□□□□ -1.88
CDK3Q00526 AC123904.2-201ENST00000548059 300 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 AC005476.1-201ENST00000554427 397 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 ZNF192P1-203ENST00000565888 810 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 AC012414.6-201ENST00000568241 401 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 AL356432.3-201ENST00000568952 465 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.33□□□□□ -1.88
CDK3Q00526 AC068276.1-201ENST00000605793 379 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 AC090425.2-201ENST00000608818 501 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 AC004908.2-201ENST00000609090 574 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 AL158063.1-201ENST00000615349 536 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CDK3Q00526 AC009159.1-201ENST00000618386 642 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 AL603758.1-201ENST00000618654 241 ntBASIC3.33□□□□□ -1.88
CDK3Q00526 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.33□□□□□ -1.88
CDK3Q00526 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CDK3Q00526 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDK3Q00526 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDK3Q00526 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDK3Q00526 AL138713.1-201ENST00000624026 2130 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDK3Q00526 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDK3Q00526 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDK3Q00526 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDK3Q00526 SNORD116-9-201ENST00000384000 95 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 SNORD116-3-201ENST00000384287 95 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 SNORD116-7-201ENST00000384404 95 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 SNORD116-5-201ENST00000384462 95 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 SNORA11.1-201ENST00000408133 129 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 Y_RNA.608-201ENST00000410647 95 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 UBE2FP1-201ENST00000416536 447 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 USP9YP13-201ENST00000417797 480 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 AL159169.1-201ENST00000421119 127 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 AC002075.2-201ENST00000425207 252 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.32□□□□□ -1.88
CDK3Q00526 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.32□□□□□ -1.88
CDK3Q00526 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.32□□□□□ -1.88
CDK3Q00526 AC008264.1-201ENST00000447612 367 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 HMGN2P7-201ENST00000456186 273 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 SNRPGP3-201ENST00000469405 227 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.32□□□□□ -1.88
CDK3Q00526 RNU6-201P-201ENST00000517100 61 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.32□□□□□ -1.88
CDK3Q00526 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDK3Q00526 AP000857.1-201ENST00000532151 543 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.32□□□□□ -1.88
CDK3Q00526 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.32□□□□□ -1.88
CDK3Q00526 AL133153.1-201ENST00000557756 303 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.32□□□□□ -1.88
CDK3Q00526 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.32□□□□□ -1.88
CDK3Q00526 AC112191.3-201ENST00000604371 277 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 AP002826.1-201ENST00000608835 315 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.32□□□□□ -1.88
CDK3Q00526 AC008121.2-201ENST00000614647 523 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.32□□□□□ -1.88
CDK3Q00526 AC010149.2-201ENST00000637608 315 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDK3Q00526 AC073346.2-201ENST00000624724 2058 ntBASIC3.32□□□□□ -1.88
CDK3Q00526 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
CDK3Q00526 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDK3Q00526 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
CDK3Q00526 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK3Q00526 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDK3Q00526 TNPO1P3-201ENST00000436471 2662 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CDK3Q00526 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.31□□□□□ -1.88
CDK3Q00526 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CDK3Q00526 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.31□□□□□ -1.88
CDK3Q00526 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK3Q00526 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK3Q00526 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDK3Q00526 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK3Q00526 DEFB108F-201ENST00000344638 222 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 RNU5A-1-201ENST00000362698 116 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK3Q00526 U3.19-201ENST00000390893 196 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 SNORD115.1-201ENST00000391109 76 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 RN7SKP142-201ENST00000411236 328 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AC126124.2-201ENST00000413542 321 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.31□□□□□ -1.88
CDK3Q00526 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.31□□□□□ -1.88
CDK3Q00526 YPEL5P1-201ENST00000419731 367 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.31□□□□□ -1.88
CDK3Q00526 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms