Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.99□□□□□ -2.09
H3F3AP84243 MRPL42P6-201ENST00000486397 371 ntBASIC1.99□□□□□ -2.09
H3F3AP84243 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.99□□□□□ -2.09
H3F3AP84243 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.99□□□□□ -2.09
H3F3AP84243 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.99□□□□□ -2.09
H3F3AP84243 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.99□□□□□ -2.09
H3F3AP84243 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.99□□□□□ -2.09
H3F3AP84243 AC026464.5-201ENST00000562497 722 ntBASIC1.99□□□□□ -2.09
H3F3AP84243 SNORD53-201ENST00000579969 78 ntBASIC1.99□□□□□ -2.09
H3F3AP84243 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.99□□□□□ -2.09
H3F3AP84243 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
H3F3AP84243 AC013444.2-201ENST00000603317 787 ntBASIC1.99□□□□□ -2.09
H3F3AP84243 AL356280.1-201ENST00000603614 379 ntBASIC1.99□□□□□ -2.09
H3F3AP84243 AC002487.1-201ENST00000604565 994 ntBASIC1.99□□□□□ -2.09
H3F3AP84243 BNIP3P4-201ENST00000604946 565 ntBASIC1.99□□□□□ -2.09
H3F3AP84243 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
H3F3AP84243 AC093591.3-201ENST00000634516 308 ntBASIC1.99□□□□□ -2.09
H3F3AP84243 AC010149.2-201ENST00000637608 315 ntBASIC1.99□□□□□ -2.09
H3F3AP84243 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.99□□□□□ -2.09
H3F3AP84243 MIR7515-201ENST00000637837 67 ntBASIC1.99□□□□□ -2.09
H3F3AP84243 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
H3F3AP84243 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
H3F3AP84243 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
H3F3AP84243 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
H3F3AP84243 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
H3F3AP84243 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
H3F3AP84243 RNU1-73P-201ENST00000383971 164 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
H3F3AP84243 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 RNU6-77P-201ENST00000410554 91 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.98□□□□□ -2.09
H3F3AP84243 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.98□□□□□ -2.09
H3F3AP84243 AL714022.1-201ENST00000439897 151 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 FGF7P5-201ENST00000441829 291 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 COX6CP12-201ENST00000446748 202 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.98□□□□□ -2.09
H3F3AP84243 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.98□□□□□ -2.09
H3F3AP84243 RNU7-23P-201ENST00000459465 62 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 AC078857.1-201ENST00000469870 667 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 AC116337.2-201ENST00000477662 156 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 AC004263.1-201ENST00000479327 332 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 NDUFB4P2-201ENST00000509515 391 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.98□□□□□ -2.09
H3F3AP84243 AC121758.2-201ENST00000553271 193 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.98□□□□□ -2.09
H3F3AP84243 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.98□□□□□ -2.09
H3F3AP84243 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.98□□□□□ -2.09
H3F3AP84243 MIR4513-201ENST00000581077 86 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 BX322635.1-201ENST00000605804 496 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
H3F3AP84243 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.98□□□□□ -2.09
H3F3AP84243 AC245884.12-201ENST00000615364 59 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 AC073569.3-201ENST00000619055 682 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 OR5H6-203ENST00000642105 978 ntBASIC1.98□□□□□ -2.09
H3F3AP84243 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.98□□□□□ -2.09
H3F3AP84243 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.98□□□□□ -2.09
H3F3AP84243 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
H3F3AP84243 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.97□□□□□ -2.09
H3F3AP84243 AC008432.1-201ENST00000615912 1320 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 ZNF658B-202ENST00000615961 3375 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.97□□□□□ -2.09
H3F3AP84243 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
H3F3AP84243 CKAP2P1-201ENST00000555477 2049 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
H3F3AP84243 DEFB108F-201ENST00000344638 222 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
H3F3AP84243 AL024474.1-201ENST00000404655 591 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 BOLA3P4-201ENST00000418151 400 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 WARS2P1-201ENST00000429678 537 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 ATP5F1P1-201ENST00000433775 569 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 AC024082.2-201ENST00000434771 238 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 RPL23AP16-201ENST00000441715 421 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 HMGN1P5-201ENST00000448591 263 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.97□□□□□ -2.09
H3F3AP84243 RNU6-420P-201ENST00000458780 107 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 AC017007.3-201ENST00000479865 435 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.97□□□□□ -2.09
H3F3AP84243 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.97□□□□□ -2.09
H3F3AP84243 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.97□□□□□ -2.09
H3F3AP84243 DEFB108D-201ENST00000527787 222 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.97□□□□□ -2.09
H3F3AP84243 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
H3F3AP84243 RPS3AP23-202ENST00000574601 686 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 AC103710.4-201ENST00000609301 899 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 AC013562.2-201ENST00000611632 603 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 AC005332.10-201ENST00000612725 619 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.97□□□□□ -2.09
H3F3AP84243 AC009032.1-201ENST00000617574 431 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 AC097714.1-201ENST00000511272 1647 ntBASIC1.97□□□□□ -2.09
H3F3AP84243 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
H3F3AP84243 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
H3F3AP84243 ZNF720P1-201ENST00000562403 1939 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 SNORD51-201ENST00000384320 80 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
H3F3AP84243 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.96□□□□□ -2.1
H3F3AP84243 AL589655.1-201ENST00000405398 482 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 SNORA3.2-201ENST00000408221 125 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms