Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4□□□□□ -1.77
NKX6-1P78426 AC024614.3-201ENST00000637860 256 ntBASIC4□□□□□ -1.77
NKX6-1P78426 AC004972.1-201ENST00000623934 2209 ntBASIC4□□□□□ -1.77
NKX6-1P78426 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4□□□□□ -1.77
NKX6-1P78426 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NKX6-1P78426 AL136164.3-201ENST00000624429 3978 ntBASIC4□□□□□ -1.77
NKX6-1P78426 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NKX6-1P78426 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NKX6-1P78426 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX6-1P78426 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX6-1P78426 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.99□□□□□ -1.77
NKX6-1P78426 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.99□□□□□ -1.77
NKX6-1P78426 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX6-1P78426 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NKX6-1P78426 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX6-1P78426 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX6-1P78426 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX6-1P78426 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX6-1P78426 RPL7P26-201ENST00000333817 754 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 RNU1-108P-201ENST00000362556 161 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 SNORD115-7-201ENST00000365306 82 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 AL359837.1-201ENST00000381357 287 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 AL592291.1-201ENST00000403830 352 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 RNU2-71P-201ENST00000411395 189 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 OR6C66P-201ENST00000414917 930 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX6-1P78426 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX6-1P78426 NUTF2P3-201ENST00000448540 384 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 SNRPFP3-201ENST00000457792 225 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 SCARNA10-201ENST00000459255 330 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 RPS27AP17-201ENST00000463344 455 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 RN7SL303P-201ENST00000469773 251 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX6-1P78426 RPL38P4-201ENST00000502376 214 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX6-1P78426 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX6-1P78426 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX6-1P78426 OR5B19P-201ENST00000531766 928 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX6-1P78426 ADI1P3-201ENST00000549509 470 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX6-1P78426 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX6-1P78426 AC022968.1-201ENST00000567372 442 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX6-1P78426 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX6-1P78426 IPO5P1-202ENST00000600039 287 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 BNIP3P30-201ENST00000601184 574 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX6-1P78426 AC015813.4-201ENST00000610469 179 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX6-1P78426 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX6-1P78426 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX6-1P78426 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX6-1P78426 RIOK3P1-201ENST00000418778 1528 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX6-1P78426 PNPT1P2-201ENST00000456768 2050 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 USP8P1-201ENST00000494673 3183 ntBASIC3.99□□□□□ -1.77
NKX6-1P78426 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX6-1P78426 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX6-1P78426 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX6-1P78426 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NKX6-1P78426 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NKX6-1P78426 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NKX6-1P78426 AC108467.2-201ENST00000617640 1597 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NKX6-1P78426 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NKX6-1P78426 AC116096.1-201ENST00000566804 2314 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
NKX6-1P78426 AC021146.4-201ENST00000309229 279 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 SNORA72.1-201ENST00000363485 129 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 RNU5E-4P-201ENST00000364931 120 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 Y_RNA.576-201ENST00000384781 102 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 MIR514A1-201ENST00000385133 98 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 MIR195-201ENST00000385194 87 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 RNU6-817P-201ENST00000391083 104 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 RPS26P8-201ENST00000393490 348 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AL445189.1-201ENST00000405722 338 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AL606923.1-201ENST00000406616 190 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AL513331.1-201ENST00000411908 397 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 RPL30P16-201ENST00000419341 429 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX6-1P78426 AL451054.2-201ENST00000420896 202 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 TXNP1-201ENST00000441872 371 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AL121877.1-201ENST00000453704 622 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX6-1P78426 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX6-1P78426 RPL37P6-201ENST00000460682 294 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX6-1P78426 EIF4EP3-201ENST00000498782 656 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX6-1P78426 AC018710.1-201ENST00000506509 158 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NKX6-1P78426 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
NKX6-1P78426 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX6-1P78426 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.98□□□□□ -1.77
NKX6-1P78426 RNU4-29P-201ENST00000515943 174 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 RNU2-58P-201ENST00000516403 183 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms