Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNA5SP87-201ENST00000384155 118 ntBASIC4.6□□□□□ -1.67
YBX1P67809 Y_RNA.473-201ENST00000384333 102 ntBASIC4.6□□□□□ -1.67
YBX1P67809 RNU4-70P-201ENST00000384579 139 ntBASIC4.6□□□□□ -1.67
YBX1P67809 RNU6-328P-201ENST00000390887 106 ntBASIC4.6□□□□□ -1.67
YBX1P67809 AL049697.2-201ENST00000403708 294 ntBASIC4.6□□□□□ -1.67
YBX1P67809 NDUFS5P1-201ENST00000405668 289 ntBASIC4.6□□□□□ -1.67
YBX1P67809 RNU6-1050P-201ENST00000410388 107 ntBASIC4.6□□□□□ -1.67
YBX1P67809 RN7SKP100-201ENST00000411258 284 ntBASIC4.6□□□□□ -1.67
YBX1P67809 AL669831.1-202ENST00000428504 417 ntBASIC4.6□□□□□ -1.67
YBX1P67809 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.6□□□□□ -1.67
YBX1P67809 RPS24P13-201ENST00000442520 397 ntBASIC4.6□□□□□ -1.67
YBX1P67809 OR1H1P-201ENST00000448731 937 ntBASIC4.6□□□□□ -1.67
YBX1P67809 RPS15AP27-201ENST00000449183 343 ntBASIC4.6□□□□□ -1.67
YBX1P67809 DEFB109F-201ENST00000491870 277 ntBASIC4.6□□□□□ -1.67
YBX1P67809 AC104564.1-201ENST00000493028 407 ntBASIC4.6□□□□□ -1.67
YBX1P67809 RPL30P11-201ENST00000495304 339 ntBASIC4.6□□□□□ -1.67
YBX1P67809 AC116337.1-201ENST00000509680 687 ntBASIC4.6□□□□□ -1.67
YBX1P67809 AC108078.2-201ENST00000510750 236 ntBASIC4.6□□□□□ -1.67
YBX1P67809 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.6□□□□□ -1.67
YBX1P67809 RNU6-699P-201ENST00000517081 110 ntBASIC4.6□□□□□ -1.67
YBX1P67809 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.6□□□□□ -1.67
YBX1P67809 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
YBX1P67809 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.6□□□□□ -1.67
YBX1P67809 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.6□□□□□ -1.67
YBX1P67809 AC209154.1-201ENST00000582156 337 ntBASIC4.6□□□□□ -1.67
YBX1P67809 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.6□□□□□ -1.67
YBX1P67809 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.6□□□□□ -1.67
YBX1P67809 ATP1B3P1-201ENST00000605365 821 ntBASIC4.6□□□□□ -1.67
YBX1P67809 AC012443.1-201ENST00000605605 231 ntBASIC4.6□□□□□ -1.67
YBX1P67809 FAM157A-202ENST00000615155 405 ntBASIC4.6□□□□□ -1.67
YBX1P67809 MIR6864-201ENST00000617935 70 ntBASIC4.6□□□□□ -1.67
YBX1P67809 MIR7703-201ENST00000620784 77 ntBASIC4.6□□□□□ -1.67
YBX1P67809 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.6□□□□□ -1.67
YBX1P67809 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
YBX1P67809 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.6□□□□□ -1.67
YBX1P67809 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
YBX1P67809 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
YBX1P67809 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
YBX1P67809 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
YBX1P67809 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
YBX1P67809 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
YBX1P67809 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
YBX1P67809 RNU6-1078P-201ENST00000364522 103 ntBASIC4.59□□□□□ -1.67
YBX1P67809 Y_RNA.257-201ENST00000364596 102 ntBASIC4.59□□□□□ -1.67
YBX1P67809 DEFB109C-201ENST00000382575 264 ntBASIC4.59□□□□□ -1.67
YBX1P67809 DEFB109B-201ENST00000382656 264 ntBASIC4.59□□□□□ -1.67
YBX1P67809 Y_RNA.404-201ENST00000383978 102 ntBASIC4.59□□□□□ -1.67
YBX1P67809 SNORA75.6-201ENST00000391318 127 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AL031119.1-201ENST00000404707 1879 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.59□□□□□ -1.67
YBX1P67809 AC114755.2-201ENST00000413520 361 ntBASIC4.59□□□□□ -1.67
YBX1P67809 BX682237.1-201ENST00000415016 335 ntBASIC4.59□□□□□ -1.67
YBX1P67809 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
YBX1P67809 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.59□□□□□ -1.67
YBX1P67809 AC008267.5-201ENST00000424928 265 ntBASIC4.59□□□□□ -1.67
YBX1P67809 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AC093106.2-201ENST00000428212 385 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.59□□□□□ -1.67
YBX1P67809 AC005154.2-201ENST00000438110 379 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AC004938.1-201ENST00000438468 308 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.59□□□□□ -1.67
YBX1P67809 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.59□□□□□ -1.67
YBX1P67809 RPL36AP13-201ENST00000457490 317 ntBASIC4.59□□□□□ -1.67
YBX1P67809 CEACAMP4-201ENST00000457676 421 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AC104472.2-201ENST00000469035 601 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AC022034.3-201ENST00000471393 478 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AC092451.1-201ENST00000480211 153 ntBASIC4.59□□□□□ -1.67
YBX1P67809 RPL23AP55-201ENST00000498163 452 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.59□□□□□ -1.67
YBX1P67809 RNU6-470P-201ENST00000515954 104 ntBASIC4.59□□□□□ -1.67
YBX1P67809 RNU6-1092P-201ENST00000516955 87 ntBASIC4.59□□□□□ -1.67
YBX1P67809 RNU1-54P-201ENST00000517181 120 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.59□□□□□ -1.67
YBX1P67809 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.59□□□□□ -1.67
YBX1P67809 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.59□□□□□ -1.67
YBX1P67809 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
YBX1P67809 EDDM3DP-201ENST00000554692 434 ntBASIC4.59□□□□□ -1.67
YBX1P67809 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.59□□□□□ -1.67
YBX1P67809 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.59□□□□□ -1.67
YBX1P67809 AL158163.1-201ENST00000603915 1649 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AL391358.1-201ENST00000605342 190 ntBASIC4.59□□□□□ -1.67
YBX1P67809 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.59□□□□□ -1.67
YBX1P67809 U2.1-201ENST00000618978 145 ntBASIC4.59□□□□□ -1.67
YBX1P67809 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
YBX1P67809 MIR6853-201ENST00000619642 74 ntBASIC4.59□□□□□ -1.67
YBX1P67809 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
YBX1P67809 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
YBX1P67809 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
YBX1P67809 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.58□□□□□ -1.68
YBX1P67809 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
YBX1P67809 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.58□□□□□ -1.68
YBX1P67809 AC011978.2-201ENST00000569835 2054 ntBASIC4.58□□□□□ -1.68
YBX1P67809 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
YBX1P67809 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
YBX1P67809 AC005592.1-201ENST00000566527 1640 ntBASIC4.58□□□□□ -1.68
YBX1P67809 MTCO1P24-201ENST00000515438 1558 ntBASIC4.58□□□□□ -1.68
YBX1P67809 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.58□□□□□ -1.68
YBX1P67809 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
YBX1P67809 MAPK10-304ENST00000641341 3984 ntBASIC4.58□□□□□ -1.68
YBX1P67809 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms