Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU5E-5P-201ENST00000365379 116 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 AL513331.1-201ENST00000411908 397 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 AL590365.1-201ENST00000450788 243 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 RNU6-420P-201ENST00000458780 107 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 AC025445.1-201ENST00000502728 300 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 AC004069.2-201ENST00000505438 1114 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDL3P58872 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDL3P58872 RNU6-1282P-201ENST00000516735 96 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 RNU6-579P-201ENST00000516879 102 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDL3P58872 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDL3P58872 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDL3P58872 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDL3P58872 AC002545.1-201ENST00000592511 181 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 AC079089.3-201ENST00000603094 673 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 MIR7851-201ENST00000610611 160 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.24□□□□□ -1.73
RHBDL3P58872 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.24□□□□□ -1.73
RHBDL3P58872 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.24□□□□□ -1.73
RHBDL3P58872 MAPK10-362ENST00000641864 4484 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
RHBDL3P58872 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDL3P58872 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.23□□□□□ -1.73
RHBDL3P58872 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RHBDL3P58872 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.23□□□□□ -1.73
RHBDL3P58872 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDL3P58872 RNU6-1284P-201ENST00000363701 100 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 MTCYBP36-201ENST00000404146 440 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 ELOCP17-201ENST00000414751 326 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 SPA17P1-201ENST00000416656 452 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.23□□□□□ -1.73
RHBDL3P58872 AC005300.1-201ENST00000428401 373 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 TIMM9P1-201ENST00000436122 256 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 AC005094.1-201ENST00000440420 368 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 UBE2D3P4-201ENST00000441973 436 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 CBWD4P-201ENST00000445695 655 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.23□□□□□ -1.73
RHBDL3P58872 USP9YP12-201ENST00000450481 570 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.23□□□□□ -1.73
RHBDL3P58872 RPS20P22-201ENST00000473700 357 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 AC069499.1-201ENST00000489433 509 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 AC022616.6-201ENST00000520479 119 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDL3P58872 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.23□□□□□ -1.73
RHBDL3P58872 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.23□□□□□ -1.73
RHBDL3P58872 AC123904.3-201ENST00000547218 814 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 AC004024.1-201ENST00000549244 247 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.23□□□□□ -1.73
RHBDL3P58872 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.23□□□□□ -1.73
RHBDL3P58872 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.23□□□□□ -1.73
RHBDL3P58872 MIR3146-201ENST00000580367 79 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.23□□□□□ -1.73
RHBDL3P58872 MIR3609-201ENST00000582661 80 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 AC245517.5-201ENST00000611529 162 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 FRG1KP-201ENST00000623592 341 ntBASIC4.23□□□□□ -1.73
RHBDL3P58872 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.23□□□□□ -1.73
RHBDL3P58872 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.23□□□□□ -1.73
RHBDL3P58872 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.23□□□□□ -1.73
RHBDL3P58872 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RHBDL3P58872 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDL3P58872 AC022336.2-201ENST00000568966 2538 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RHBDL3P58872 MIR491-201ENST00000384877 84 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
RHBDL3P58872 Y_RNA.608-201ENST00000410647 95 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 RNA5SP38-201ENST00000410750 119 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 RN7SKP140-201ENST00000411196 284 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 RNA5SP107-201ENST00000411358 122 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.22□□□□□ -1.73
RHBDL3P58872 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.22□□□□□ -1.73
RHBDL3P58872 AC005326.1-201ENST00000429197 123 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 AC092573.2-201ENST00000434546 243 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.22□□□□□ -1.73
RHBDL3P58872 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.22□□□□□ -1.73
RHBDL3P58872 BX510359.1-201ENST00000456973 237 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RHBDL3P58872 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RHBDL3P58872 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDL3P58872 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.22□□□□□ -1.73
RHBDL3P58872 SNORD59.2-201ENST00000516873 68 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 NRON-201ENST00000517270 370 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.22□□□□□ -1.73
RHBDL3P58872 NCAPGP2-201ENST00000557911 754 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.22□□□□□ -1.73
RHBDL3P58872 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.22□□□□□ -1.73
RHBDL3P58872 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.22□□□□□ -1.73
RHBDL3P58872 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.22□□□□□ -1.73
RHBDL3P58872 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.22□□□□□ -1.73
RHBDL3P58872 ROCK1P1-201ENST00000573767 549 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 MIR5195-201ENST00000583555 115 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 AP001981.2-201ENST00000603241 418 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 AC013553.2-201ENST00000604244 589 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 AC027807.2-201ENST00000616099 408 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.22□□□□□ -1.73
RHBDL3P58872 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.22□□□□□ -1.73
RHBDL3P58872 ZNF833P-201ENST00000424938 1494 ntBASIC4.22□□□□□ -1.73
RHBDL3P58872 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDL3P58872 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms