Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PEX3P56589 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.14□□□□□ -1.91
PEX3P56589 MTCO2P5-201ENST00000422621 426 ntBASIC3.14□□□□□ -1.91
PEX3P56589 AC019178.2-201ENST00000423595 505 ntBASIC3.14□□□□□ -1.91
PEX3P56589 AL035407.1-201ENST00000429211 571 ntBASIC3.14□□□□□ -1.91
PEX3P56589 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.14□□□□□ -1.91
PEX3P56589 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.14□□□□□ -1.91
PEX3P56589 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.14□□□□□ -1.91
PEX3P56589 AC107083.1-201ENST00000439643 279 ntBASIC3.14□□□□□ -1.91
PEX3P56589 AC093156.1-201ENST00000440382 670 ntBASIC3.14□□□□□ -1.91
PEX3P56589 MTND1P26-201ENST00000440488 538 ntBASIC3.14□□□□□ -1.91
PEX3P56589 AC002381.1-201ENST00000447049 280 ntBASIC3.14□□□□□ -1.91
PEX3P56589 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.14□□□□□ -1.91
PEX3P56589 ART2BP-201ENST00000453501 499 ntBASIC3.14□□□□□ -1.91
PEX3P56589 ATG12P2-201ENST00000456830 416 ntBASIC3.14□□□□□ -1.91
PEX3P56589 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.14□□□□□ -1.91
PEX3P56589 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.14□□□□□ -1.91
PEX3P56589 HIGD1AP13-201ENST00000509878 289 ntBASIC3.14□□□□□ -1.91
PEX3P56589 AC010625.1-201ENST00000511296 403 ntBASIC3.14□□□□□ -1.91
PEX3P56589 RNA5SP216-201ENST00000516111 123 ntBASIC3.14□□□□□ -1.91
PEX3P56589 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.14□□□□□ -1.91
PEX3P56589 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.14□□□□□ -1.91
PEX3P56589 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.14□□□□□ -1.91
PEX3P56589 AC005951.1-201ENST00000576706 485 ntBASIC3.14□□□□□ -1.91
PEX3P56589 LARP7P3-201ENST00000579888 337 ntBASIC3.14□□□□□ -1.91
PEX3P56589 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.14□□□□□ -1.91
PEX3P56589 NIFKP6-201ENST00000598115 845 ntBASIC3.14□□□□□ -1.91
PEX3P56589 XIAPP1-201ENST00000603162 600 ntBASIC3.14□□□□□ -1.91
PEX3P56589 AL033523.1-201ENST00000605153 153 ntBASIC3.14□□□□□ -1.91
PEX3P56589 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.14□□□□□ -1.91
PEX3P56589 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.14□□□□□ -1.91
PEX3P56589 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.14□□□□□ -1.91
PEX3P56589 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PEX3P56589 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PEX3P56589 RPL21P132-201ENST00000331267 462 ntBASIC3.13□□□□□ -1.91
PEX3P56589 MIR512-1-201ENST00000384913 84 ntBASIC3.13□□□□□ -1.91
PEX3P56589 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PEX3P56589 RN7SKP123-201ENST00000410732 291 ntBASIC3.13□□□□□ -1.91
PEX3P56589 MTATP6P27-201ENST00000416987 621 ntBASIC3.13□□□□□ -1.91
PEX3P56589 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.13□□□□□ -1.91
PEX3P56589 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.13□□□□□ -1.91
PEX3P56589 RPS6P15-201ENST00000431996 751 ntBASIC3.13□□□□□ -1.91
PEX3P56589 CETN4P-201ENST00000432407 469 ntBASIC3.13□□□□□ -1.91
PEX3P56589 RSU1P2-202ENST00000437884 485 ntBASIC3.13□□□□□ -1.91
PEX3P56589 AL117351.1-201ENST00000438864 766 ntBASIC3.13□□□□□ -1.91
PEX3P56589 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PEX3P56589 AC025750.2-201ENST00000442609 450 ntBASIC3.13□□□□□ -1.91
PEX3P56589 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.13□□□□□ -1.91
PEX3P56589 Z82190.1-201ENST00000454534 490 ntBASIC3.13□□□□□ -1.91
PEX3P56589 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.13□□□□□ -1.91
PEX3P56589 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.13□□□□□ -1.91
PEX3P56589 AP004217.1-201ENST00000480579 346 ntBASIC3.13□□□□□ -1.91
PEX3P56589 RPL31P13-201ENST00000484151 370 ntBASIC3.13□□□□□ -1.91
PEX3P56589 HMGB1P36-201ENST00000487709 576 ntBASIC3.13□□□□□ -1.91
PEX3P56589 AC023424.2-201ENST00000493479 777 ntBASIC3.13□□□□□ -1.91
PEX3P56589 COX7A2P2-201ENST00000505291 250 ntBASIC3.13□□□□□ -1.91
PEX3P56589 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.13□□□□□ -1.91
PEX3P56589 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.13□□□□□ -1.91
PEX3P56589 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PEX3P56589 AC087276.1-201ENST00000529659 480 ntBASIC3.13□□□□□ -1.91
PEX3P56589 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PEX3P56589 AC024224.1-201ENST00000538284 609 ntBASIC3.13□□□□□ -1.91
PEX3P56589 OR6C7P-201ENST00000547875 934 ntBASIC3.13□□□□□ -1.91
PEX3P56589 ELOCP32-201ENST00000548625 324 ntBASIC3.13□□□□□ -1.91
PEX3P56589 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.13□□□□□ -1.91
PEX3P56589 AC087481.2-201ENST00000565492 330 ntBASIC3.13□□□□□ -1.91
PEX3P56589 AC106782.4-201ENST00000568264 210 ntBASIC3.13□□□□□ -1.91
PEX3P56589 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.13□□□□□ -1.91
PEX3P56589 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.13□□□□□ -1.91
PEX3P56589 AP000811.1-201ENST00000603803 651 ntBASIC3.13□□□□□ -1.91
PEX3P56589 AC128687.1-201ENST00000605304 619 ntBASIC3.13□□□□□ -1.91
PEX3P56589 AL020991.1-201ENST00000612314 373 ntBASIC3.13□□□□□ -1.91
PEX3P56589 AC004223.4-201ENST00000612426 332 ntBASIC3.13□□□□□ -1.91
PEX3P56589 AC018755.4-201ENST00000619715 454 ntBASIC3.13□□□□□ -1.91
PEX3P56589 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.13□□□□□ -1.91
PEX3P56589 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.13□□□□□ -1.91
PEX3P56589 AP003122.5-201ENST00000527668 3766 ntBASIC3.13□□□□□ -1.91
PEX3P56589 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
PEX3P56589 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PEX3P56589 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PEX3P56589 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.12□□□□□ -1.91
PEX3P56589 RNU6-500P-201ENST00000362349 107 ntBASIC3.12□□□□□ -1.91
PEX3P56589 Y_RNA.234-201ENST00000364409 97 ntBASIC3.12□□□□□ -1.91
PEX3P56589 RNU5A-2P-201ENST00000384337 116 ntBASIC3.12□□□□□ -1.91
PEX3P56589 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PEX3P56589 AL138880.1-201ENST00000405824 642 ntBASIC3.12□□□□□ -1.91
PEX3P56589 RN7SKP266-201ENST00000410232 287 ntBASIC3.12□□□□□ -1.91
PEX3P56589 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.12□□□□□ -1.91
PEX3P56589 AC099677.1-201ENST00000420575 175 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.12□□□□□ -1.91
PEX3P56589 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.12□□□□□ -1.91
PEX3P56589 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.12□□□□□ -1.91
PEX3P56589 UBE2FP3-201ENST00000436366 524 ntBASIC3.12□□□□□ -1.91
PEX3P56589 SDCBPP1-201ENST00000440192 890 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC112653.1-201ENST00000443851 386 ntBASIC3.12□□□□□ -1.91
PEX3P56589 GAPDHP27-201ENST00000447427 1020 ntBASIC3.12□□□□□ -1.91
PEX3P56589 OR6C5P-201ENST00000452388 923 ntBASIC3.12□□□□□ -1.91
PEX3P56589 ARPC3P2-201ENST00000457786 533 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AP001025.2-201ENST00000490908 477 ntBASIC3.12□□□□□ -1.91
PEX3P56589 AC104685.1-201ENST00000502445 371 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms