Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC104073.3-201ENST00000610942 955 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 AC019176.2-201ENST00000611579 315 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 Z99129.1-201ENST00000612510 255 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 AC002550.2-201ENST00000621246 394 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 AL360181.4-201ENST00000621752 134 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 AC079597.1-201ENST00000624306 508 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 AC084035.1-201ENST00000634543 607 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.77□□□□□ -1.81
HDAC4P56524 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.77□□□□□ -1.81
HDAC4P56524 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HDAC4P56524 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
HDAC4P56524 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HDAC4P56524 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
HDAC4P56524 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
HDAC4P56524 MTND5P33-201ENST00000571250 1450 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 Y_RNA.46-201ENST00000362695 102 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 RNA5SP119-201ENST00000362715 117 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 MIR491-201ENST00000384877 84 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HDAC4P56524 U3.20-201ENST00000390909 217 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 SNORD115.1-201ENST00000391109 76 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AL359704.1-201ENST00000411586 781 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AC078974.1-201ENST00000411597 223 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.76□□□□□ -1.81
HDAC4P56524 ATP5A1P2-201ENST00000412323 255 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AC007899.1-201ENST00000412776 775 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.76□□□□□ -1.81
HDAC4P56524 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.76□□□□□ -1.81
HDAC4P56524 USP9YP13-201ENST00000417797 480 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 RPL21P32-201ENST00000419877 477 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AL035423.1-201ENST00000420331 213 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.76□□□□□ -1.81
HDAC4P56524 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.76□□□□□ -1.81
HDAC4P56524 AC112653.1-201ENST00000443851 386 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AC010655.1-201ENST00000449336 292 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC4P56524 AP1S2P1-201ENST00000457344 379 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC4P56524 SNORD121B-201ENST00000458838 81 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AC011825.1-201ENST00000484967 388 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.76□□□□□ -1.81
HDAC4P56524 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HDAC4P56524 MTND2P33-201ENST00000506452 1031 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC4P56524 AC017037.2-201ENST00000513850 890 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 RNU6-1095P-201ENST00000516148 108 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 SNORA74D-201ENST00000516404 141 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 RNA5SP468-201ENST00000516782 93 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AC022878.1-201ENST00000530684 149 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.76□□□□□ -1.81
HDAC4P56524 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.76□□□□□ -1.81
HDAC4P56524 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC4P56524 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC4P56524 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC4P56524 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.76□□□□□ -1.81
HDAC4P56524 AC034268.2-201ENST00000571784 482 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC4P56524 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.76□□□□□ -1.81
HDAC4P56524 AC007179.3-201ENST00000604976 235 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 RNVU1-4-201ENST00000612985 164 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AC012150.2-201ENST00000621300 544 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.76□□□□□ -1.81
HDAC4P56524 AC012442.3-202ENST00000636742 206 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 AC007823.1-201ENST00000569932 1566 ntBASIC3.76□□□□□ -1.81
HDAC4P56524 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HDAC4P56524 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HDAC4P56524 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HDAC4P56524 Y_RNA.41-201ENST00000362646 102 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 DEFB109C-201ENST00000382575 264 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 DEFB109B-201ENST00000382656 264 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 RPL21P17-201ENST00000397467 475 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 RPL7P25-201ENST00000404151 721 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 RN7SKP285-201ENST00000410137 318 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.75□□□□□ -1.81
HDAC4P56524 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.75□□□□□ -1.81
HDAC4P56524 AC002075.2-201ENST00000425207 252 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 BX890604.2-201ENST00000427883 474 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.75□□□□□ -1.81
HDAC4P56524 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.75□□□□□ -1.81
HDAC4P56524 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.75□□□□□ -1.81
HDAC4P56524 UBE2V1P13-201ENST00000436983 439 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HDAC4P56524 RPS3AP46-201ENST00000448352 682 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.75□□□□□ -1.81
HDAC4P56524 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.75□□□□□ -1.81
HDAC4P56524 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.75□□□□□ -1.81
HDAC4P56524 AC084357.1-201ENST00000473404 255 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 ACTR3P3-201ENST00000480448 893 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 AC112204.1-201ENST00000502591 103 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 AC096751.1-202ENST00000502691 1067 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 KLHL2P1-201ENST00000508691 521 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.75□□□□□ -1.81
HDAC4P56524 RNU6-405P-201ENST00000516637 110 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 RNU6-579P-201ENST00000516879 102 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 RNU6-528P-201ENST00000516926 100 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 DUXAP2-201ENST00000519198 589 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 SYF2P1-201ENST00000550658 413 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 SETP2-201ENST00000553886 926 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms