Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC083906.5-201ENST00000503722 328 ntBASIC2.75□□□□□ -1.97
LIM2P55344 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.75□□□□□ -1.97
LIM2P55344 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.75□□□□□ -1.97
LIM2P55344 SCGB1D5P-201ENST00000515134 247 ntBASIC2.75□□□□□ -1.97
LIM2P55344 SNORA74D-201ENST00000516404 141 ntBASIC2.75□□□□□ -1.97
LIM2P55344 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.75□□□□□ -1.97
LIM2P55344 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.75□□□□□ -1.97
LIM2P55344 FAM60DP-201ENST00000524174 632 ntBASIC2.75□□□□□ -1.97
LIM2P55344 AP001804.3-201ENST00000525146 880 ntBASIC2.75□□□□□ -1.97
LIM2P55344 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.75□□□□□ -1.97
LIM2P55344 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.75□□□□□ -1.97
LIM2P55344 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.75□□□□□ -1.97
LIM2P55344 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.75□□□□□ -1.97
LIM2P55344 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.75□□□□□ -1.97
LIM2P55344 AC009097.3-201ENST00000563557 1018 ntBASIC2.75□□□□□ -1.97
LIM2P55344 AC034105.3-201ENST00000565294 442 ntBASIC2.75□□□□□ -1.97
LIM2P55344 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.75□□□□□ -1.97
LIM2P55344 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.75□□□□□ -1.97
LIM2P55344 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.75□□□□□ -1.97
LIM2P55344 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.75□□□□□ -1.97
LIM2P55344 CUL1P1-201ENST00000509510 2425 ntBASIC2.74□□□□□ -1.97
LIM2P55344 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
LIM2P55344 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LIM2P55344 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LIM2P55344 ZNF833P-201ENST00000424938 1494 ntBASIC2.74□□□□□ -1.97
LIM2P55344 RNU6-744P-201ENST00000365557 107 ntBASIC2.74□□□□□ -1.97
LIM2P55344 RNU6-1316P-201ENST00000384242 108 ntBASIC2.74□□□□□ -1.97
LIM2P55344 RNU6-1207P-201ENST00000384343 107 ntBASIC2.74□□□□□ -1.97
LIM2P55344 RNU6-851P-201ENST00000384565 107 ntBASIC2.74□□□□□ -1.97
LIM2P55344 RSL24D1P4-201ENST00000400938 484 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AL356421.1-201ENST00000403255 413 ntBASIC2.74□□□□□ -1.97
LIM2P55344 RPS3AP24-201ENST00000407896 734 ntBASIC2.74□□□□□ -1.97
LIM2P55344 MIR1305-201ENST00000408300 86 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AL451074.5-201ENST00000415894 435 ntBASIC2.74□□□□□ -1.97
LIM2P55344 SSXP9-201ENST00000417503 292 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.74□□□□□ -1.97
LIM2P55344 NEK4P1-201ENST00000433383 879 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.74□□□□□ -1.97
LIM2P55344 AC024082.2-201ENST00000434771 238 ntBASIC2.74□□□□□ -1.97
LIM2P55344 UBE2FP3-201ENST00000436366 524 ntBASIC2.74□□□□□ -1.97
LIM2P55344 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.74□□□□□ -1.97
LIM2P55344 EEF1E1P1-201ENST00000446998 430 ntBASIC2.74□□□□□ -1.97
LIM2P55344 NANOGNBP1-201ENST00000448444 480 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.74□□□□□ -1.97
LIM2P55344 AC104308.1-201ENST00000454621 333 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.74□□□□□ -1.97
LIM2P55344 RPS29P26-201ENST00000477483 171 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AC011825.1-201ENST00000484967 388 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AP001025.2-201ENST00000490908 477 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AC147055.4-201ENST00000504399 745 ntBASIC2.74□□□□□ -1.97
LIM2P55344 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.74□□□□□ -1.97
LIM2P55344 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LIM2P55344 AC022447.3-201ENST00000506865 495 ntBASIC2.74□□□□□ -1.97
LIM2P55344 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.74□□□□□ -1.97
LIM2P55344 AL359273.1-201ENST00000510918 627 ntBASIC2.74□□□□□ -1.97
LIM2P55344 MRPS36P3-201ENST00000519284 130 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AP003497.1-201ENST00000528472 562 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LIM2P55344 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.74□□□□□ -1.97
LIM2P55344 AL163153.1-201ENST00000554223 283 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.74□□□□□ -1.97
LIM2P55344 OR4K8P-201ENST00000578842 1048 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.74□□□□□ -1.97
LIM2P55344 AC105224.1-201ENST00000587055 421 ntBASIC2.74□□□□□ -1.97
LIM2P55344 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.74□□□□□ -1.97
LIM2P55344 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.74□□□□□ -1.97
LIM2P55344 AC072039.2-201ENST00000608883 439 ntBASIC2.74□□□□□ -1.97
LIM2P55344 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
LIM2P55344 AC009268.2-201ENST00000621925 457 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AC009039.2-201ENST00000624524 529 ntBASIC2.74□□□□□ -1.97
LIM2P55344 GABRG2-229ENST00000641017 3628 ntBASIC2.74□□□□□ -1.97
LIM2P55344 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LIM2P55344 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.74□□□□□ -1.97
LIM2P55344 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.74□□□□□ -1.97
LIM2P55344 AC005832.2-201ENST00000538921 1430 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AC096644.4-201ENST00000563417 2912 ntBASIC2.74□□□□□ -1.97
LIM2P55344 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.74□□□□□ -1.97
LIM2P55344 AP000526.1-201ENST00000603308 1388 ntBASIC2.74□□□□□ -1.97
LIM2P55344 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LIM2P55344 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.73□□□□□ -1.97
LIM2P55344 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.73□□□□□ -1.97
LIM2P55344 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
LIM2P55344 AC005183.1-201ENST00000603687 1979 ntBASIC2.73□□□□□ -1.97
LIM2P55344 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LIM2P55344 RNU6-76P-201ENST00000384060 104 ntBASIC2.73□□□□□ -1.97
LIM2P55344 SNORA44-201ENST00000384584 132 ntBASIC2.73□□□□□ -1.97
LIM2P55344 RPS3AP26-201ENST00000398259 784 ntBASIC2.73□□□□□ -1.97
LIM2P55344 MIR320C1-201ENST00000408566 88 ntBASIC2.73□□□□□ -1.97
LIM2P55344 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.73□□□□□ -1.97
LIM2P55344 AC109780.2-201ENST00000413467 845 ntBASIC2.73□□□□□ -1.97
LIM2P55344 EEF1A1P41-201ENST00000414667 207 ntBASIC2.73□□□□□ -1.97
LIM2P55344 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.73□□□□□ -1.97
LIM2P55344 AC090774.1-201ENST00000435925 246 ntBASIC2.73□□□□□ -1.97
LIM2P55344 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.73□□□□□ -1.97
LIM2P55344 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.73□□□□□ -1.97
LIM2P55344 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.73□□□□□ -1.97
LIM2P55344 AC026801.2-201ENST00000515352 425 ntBASIC2.73□□□□□ -1.97
LIM2P55344 SNORA70.16-201ENST00000516390 95 ntBASIC2.73□□□□□ -1.97
LIM2P55344 EEF1A1P37-201ENST00000522748 715 ntBASIC2.73□□□□□ -1.97
LIM2P55344 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms