Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PMS2P54278 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PMS2P54278 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PMS2P54278 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PMS2P54278 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PMS2P54278 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PMS2P54278 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PMS2P54278 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PMS2P54278 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
PMS2P54278 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PMS2P54278 AL161781.1-201ENST00000354277 403 ntBASIC3.8□□□□□ -1.8
PMS2P54278 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PMS2P54278 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PMS2P54278 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.8□□□□□ -1.8
PMS2P54278 RN7SKP226-201ENST00000364912 300 ntBASIC3.8□□□□□ -1.8
PMS2P54278 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.8□□□□□ -1.8
PMS2P54278 RNA5SP424-201ENST00000390988 115 ntBASIC3.8□□□□□ -1.8
PMS2P54278 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.8□□□□□ -1.8
PMS2P54278 AL158071.1-201ENST00000430315 461 ntBASIC3.8□□□□□ -1.8
PMS2P54278 AC009961.2-201ENST00000435771 251 ntBASIC3.8□□□□□ -1.8
PMS2P54278 CYCSP43-201ENST00000438233 310 ntBASIC3.8□□□□□ -1.8
PMS2P54278 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.8□□□□□ -1.8
PMS2P54278 RABEPKP1-201ENST00000440529 1026 ntBASIC3.8□□□□□ -1.8
PMS2P54278 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.8□□□□□ -1.8
PMS2P54278 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.8□□□□□ -1.8
PMS2P54278 AL353691.1-201ENST00000451332 387 ntBASIC3.8□□□□□ -1.8
PMS2P54278 RPS24P6-201ENST00000452670 400 ntBASIC3.8□□□□□ -1.8
PMS2P54278 MTCO1P42-201ENST00000457379 726 ntBASIC3.8□□□□□ -1.8
PMS2P54278 snoU13.24-201ENST00000458998 104 ntBASIC3.8□□□□□ -1.8
PMS2P54278 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.8□□□□□ -1.8
PMS2P54278 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.8□□□□□ -1.8
PMS2P54278 FCF1P3-201ENST00000496394 590 ntBASIC3.8□□□□□ -1.8
PMS2P54278 AL139099.1-201ENST00000497398 403 ntBASIC3.8□□□□□ -1.8
PMS2P54278 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.8□□□□□ -1.8
PMS2P54278 AC022483.1-201ENST00000514020 567 ntBASIC3.8□□□□□ -1.8
PMS2P54278 TRMT10BP1-201ENST00000519377 943 ntBASIC3.8□□□□□ -1.8
PMS2P54278 NDUFB9P3-201ENST00000521269 501 ntBASIC3.8□□□□□ -1.8
PMS2P54278 AC093331.1-201ENST00000521474 169 ntBASIC3.8□□□□□ -1.8
PMS2P54278 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.8□□□□□ -1.8
PMS2P54278 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PMS2P54278 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.8□□□□□ -1.8
PMS2P54278 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
PMS2P54278 RPL21P5-201ENST00000554662 472 ntBASIC3.8□□□□□ -1.8
PMS2P54278 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.8□□□□□ -1.8
PMS2P54278 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PMS2P54278 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.8□□□□□ -1.8
PMS2P54278 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.8□□□□□ -1.8
PMS2P54278 TPMTP1-201ENST00000592307 737 ntBASIC3.8□□□□□ -1.8
PMS2P54278 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.8□□□□□ -1.8
PMS2P54278 AC004853.1-201ENST00000604902 698 ntBASIC3.8□□□□□ -1.8
PMS2P54278 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.8□□□□□ -1.8
PMS2P54278 AC136475.10-201ENST00000620253 385 ntBASIC3.8□□□□□ -1.8
PMS2P54278 AC244100.1-202ENST00000621554 382 ntBASIC3.8□□□□□ -1.8
PMS2P54278 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.8□□□□□ -1.8
PMS2P54278 SEPT14P19-203ENST00000633205 211 ntBASIC3.8□□□□□ -1.8
PMS2P54278 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PMS2P54278 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PMS2P54278 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PMS2P54278 AC091152.2-201ENST00000591628 2569 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AF127577.6-201ENST00000623352 2191 ntBASIC3.79□□□□□ -1.8
PMS2P54278 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PMS2P54278 AC138915.3-201ENST00000562908 1389 ntBASIC3.79□□□□□ -1.8
PMS2P54278 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PMS2P54278 SNORA63.1-201ENST00000362493 131 ntBASIC3.79□□□□□ -1.8
PMS2P54278 RNA5SP387-201ENST00000364226 106 ntBASIC3.79□□□□□ -1.8
PMS2P54278 RNA5SP97-201ENST00000365006 84 ntBASIC3.79□□□□□ -1.8
PMS2P54278 RNU6-213P-201ENST00000384051 104 ntBASIC3.79□□□□□ -1.8
PMS2P54278 RNU6-809P-201ENST00000384461 107 ntBASIC3.79□□□□□ -1.8
PMS2P54278 MIR181A1-201ENST00000385026 110 ntBASIC3.79□□□□□ -1.8
PMS2P54278 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.79□□□□□ -1.8
PMS2P54278 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.79□□□□□ -1.8
PMS2P54278 TOMM22P1-201ENST00000418578 312 ntBASIC3.79□□□□□ -1.8
PMS2P54278 OR1AA1P-201ENST00000419597 916 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AL137014.1-201ENST00000420490 1226 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.79□□□□□ -1.8
PMS2P54278 NOTCH2P1-201ENST00000443481 624 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.79□□□□□ -1.8
PMS2P54278 GAPDHP17-201ENST00000449858 1001 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AC003071.1-201ENST00000451219 789 ntBASIC3.79□□□□□ -1.8
PMS2P54278 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.79□□□□□ -1.8
PMS2P54278 Z82190.1-201ENST00000454534 490 ntBASIC3.79□□□□□ -1.8
PMS2P54278 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.79□□□□□ -1.8
PMS2P54278 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PMS2P54278 AC010285.1-201ENST00000470580 392 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.79□□□□□ -1.8
PMS2P54278 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PMS2P54278 HMGB1P22-201ENST00000505315 124 ntBASIC3.79□□□□□ -1.8
PMS2P54278 NDUFB4P2-201ENST00000509515 391 ntBASIC3.79□□□□□ -1.8
PMS2P54278 RNU6-1095P-201ENST00000516148 108 ntBASIC3.79□□□□□ -1.8
PMS2P54278 RNU6-201P-201ENST00000517100 61 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AC022695.1-201ENST00000522089 237 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.79□□□□□ -1.8
PMS2P54278 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PMS2P54278 AC087883.1-201ENST00000551882 391 ntBASIC3.79□□□□□ -1.8
PMS2P54278 TGIF1P1-201ENST00000558095 802 ntBASIC3.79□□□□□ -1.8
PMS2P54278 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.79□□□□□ -1.8
PMS2P54278 MIR3913-1-201ENST00000577744 102 ntBASIC3.79□□□□□ -1.8
PMS2P54278 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.79□□□□□ -1.8
PMS2P54278 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.79□□□□□ -1.8
PMS2P54278 AC012669.1-201ENST00000603209 283 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 490.2 ms