Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC13P31276 IGKV2-26-201ENST00000518305 343 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC13P31276 AC239860.2-201ENST00000525886 270 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.6□□□□□ -1.83
HOXC13P31276 DEFB131D-201ENST00000526803 184 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC13P31276 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXC13P31276 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXC13P31276 AC004853.1-201ENST00000604902 698 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 AL365503.1-201ENST00000605247 905 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 AL390208.1-201ENST00000605885 644 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 AL450489.1-201ENST00000612071 468 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HOXC13P31276 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC13P31276 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXC13P31276 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXC13P31276 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXC13P31276 TPTE2P4-201ENST00000258589 1605 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HOXC13P31276 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXC13P31276 FRG1BP-201ENST00000278882 761 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 Y_RNA.194-201ENST00000363985 102 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 SNORA38.1-201ENST00000364172 131 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 CCDC58P2-201ENST00000417131 366 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC13P31276 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC13P31276 AL139421.1-201ENST00000423010 169 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC13P31276 AL512649.1-201ENST00000428997 581 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXC13P31276 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXC13P31276 COX7BP2-201ENST00000437976 242 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXC13P31276 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXC13P31276 AL831737.1-201ENST00000441288 271 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXC13P31276 RNU7-136P-201ENST00000458819 69 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXC13P31276 PCBP2P3-201ENST00000509726 843 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 MRPS33P3-201ENST00000513456 322 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 AC022880.1-201ENST00000534017 973 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.59□□□□□ -1.83
HOXC13P31276 MTND4P33-201ENST00000556706 766 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 AC010546.1-201ENST00000569391 485 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC13P31276 AL033523.1-201ENST00000605153 153 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 AL357080.1-201ENST00000617394 239 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 AL596245.1-201ENST00000618994 362 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 AC131159.1-201ENST00000621854 213 ntBASIC3.59□□□□□ -1.83
HOXC13P31276 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXC13P31276 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.59□□□□□ -1.84
HOXC13P31276 ZNF876P-202ENST00000398732 1485 ntBASIC3.59□□□□□ -1.84
HOXC13P31276 AP003122.5-201ENST00000527668 3766 ntBASIC3.59□□□□□ -1.84
HOXC13P31276 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.59□□□□□ -1.84
HOXC13P31276 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC13P31276 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC13P31276 AC010733.2-201ENST00000589496 5702 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HOXC13P31276 RNU6-952P-201ENST00000391164 108 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC13P31276 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC13P31276 USP9YP33-201ENST00000412220 421 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 MTCYBP5-201ENST00000423752 1135 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 RPL7P46-201ENST00000425129 740 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AL590383.1-201ENST00000428602 75 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AC236972.1-201ENST00000433225 199 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC13P31276 USP9YP35-201ENST00000435696 412 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AL353572.1-201ENST00000442490 417 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AL357552.1-201ENST00000445254 415 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 RAC1P7-201ENST00000445367 377 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 MTCYBP3-201ENST00000445588 1137 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 RN7SL807P-201ENST00000470923 297 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 RPL7P18-201ENST00000478965 734 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AC108860.1-201ENST00000484521 383 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AC093663.1-201ENST00000497190 394 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC13P31276 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC13P31276 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC13P31276 MTND5P13-201ENST00000513046 1079 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 SNORA70.16-201ENST00000516390 95 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AP003461.1-201ENST00000528866 78 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC13P31276 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC13P31276 MIR3124-201ENST00000582636 67 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AC067852.3-201ENST00000589177 561 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AL606834.2-201ENST00000602954 668 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AL021997.1-201ENST00000605757 193 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AL360219.1-201ENST00000610230 366 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC13P31276 AC006386.2-201ENST00000624491 75 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AC012005.1-201ENST00000624575 75 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 AC007671.2-201ENST00000637344 619 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC13P31276 AL022578.1-201ENST00000439330 1433 ntBASIC3.58□□□□□ -1.84
HOXC13P31276 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXC13P31276 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC13P31276 AC027514.1-201ENST00000588561 1603 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms