Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL139395.1-201ENST00000603662 160 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 Z82243.1-201ENST00000609432 473 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 AC007546.1-201ENST00000619452 559 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 MIR7154-201ENST00000620673 73 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
COL6A2P12110 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
COL6A2P12110 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL6A2P12110 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.53□□□□□ -1.68
COL6A2P12110 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.53□□□□□ -1.68
COL6A2P12110 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL6A2P12110 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL6A2P12110 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL6A2P12110 AC016588.2-201ENST00000632484 3021 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.53□□□□□ -1.69
COL6A2P12110 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
COL6A2P12110 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
COL6A2P12110 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL6A2P12110 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL6A2P12110 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL6A2P12110 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
COL6A2P12110 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL6A2P12110 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL6A2P12110 Y_RNA.128-201ENST00000363391 112 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 SNORD113-7-201ENST00000363762 77 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 RNU6-263P-201ENST00000363811 107 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 U3.15-201ENST00000365398 212 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 SNORD42.2-201ENST00000365570 69 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 SMIM11P1-201ENST00000369586 178 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 RNU6-946P-201ENST00000383878 107 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 RNU6-43P-201ENST00000384302 107 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 RNU1-44P-201ENST00000384453 163 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL6A2P12110 RNU6-550P-201ENST00000391057 101 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 UBE2V1P2-201ENST00000397758 440 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 MIR548K-201ENST00000408406 116 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.52□□□□□ -1.69
COL6A2P12110 RPS3AP52-201ENST00000435639 297 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AC016831.4-201ENST00000438302 307 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 H2AFZP6-201ENST00000444403 394 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AL645939.1-201ENST00000453429 797 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.52□□□□□ -1.69
COL6A2P12110 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.52□□□□□ -1.69
COL6A2P12110 Y_RNA.639-201ENST00000458981 102 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 RPL21P8-201ENST00000465083 535 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 TRBVA-201ENST00000498804 316 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL6A2P12110 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.52□□□□□ -1.69
COL6A2P12110 AC026801.2-201ENST00000515352 425 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 RNU6-1170P-201ENST00000515974 106 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 RNA5SP497-201ENST00000516081 97 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AC008694.2-201ENST00000517591 306 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 CDH12P4-201ENST00000517835 295 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 CDH12P3-201ENST00000517935 295 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 CDH12P1-201ENST00000518435 295 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AC090136.1-201ENST00000520009 240 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.52□□□□□ -1.69
COL6A2P12110 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.52□□□□□ -1.69
COL6A2P12110 AP001922.4-201ENST00000526967 290 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AP005639.2-201ENST00000527592 928 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AP000676.2-201ENST00000529711 301 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.52□□□□□ -1.69
COL6A2P12110 AC021006.3-201ENST00000530771 192 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AP000889.2-201ENST00000532684 490 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.52□□□□□ -1.69
COL6A2P12110 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.52□□□□□ -1.69
COL6A2P12110 AL110118.1-201ENST00000553543 400 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 FRG2DP-202ENST00000566967 323 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 MIR5583-1-201ENST00000580941 59 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 MIR4436B2-201ENST00000581415 91 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 MIR4436B1-201ENST00000583272 91 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 MIR3942-201ENST00000585264 109 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 BPIFA4P-203ENST00000603168 689 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 U73479.1-201ENST00000618062 168 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 AC090971.5-201ENST00000621102 293 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.52□□□□□ -1.69
COL6A2P12110 MIR4275-201ENST00000636486 87 ntBASIC4.52□□□□□ -1.69
COL6A2P12110 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
COL6A2P12110 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
COL6A2P12110 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL6A2P12110 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
COL6A2P12110 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.52□□□□□ -1.69
COL6A2P12110 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL6A2P12110 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
COL6A2P12110 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL6A2P12110 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.52□□□□□ -1.69
COL6A2P12110 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.51□□□□□ -1.69
COL6A2P12110 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 MIR448-201ENST00000362131 111 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 RN7SKP103-201ENST00000363848 320 ntBASIC4.51□□□□□ -1.69
COL6A2P12110 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.51□□□□□ -1.69
COL6A2P12110 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL6A2P12110 RNU6-1297P-201ENST00000384415 104 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms