Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RPL23AP41-201ENST00000484754 458 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AC010587.1-201ENST00000505809 469 ntBASIC3.61□□□□□ -1.83
PCNAP12004 RPL37P25-201ENST00000507308 276 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AC004062.1-201ENST00000509926 645 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.61□□□□□ -1.83
PCNAP12004 DUXAP2-201ENST00000519198 589 ntBASIC3.61□□□□□ -1.83
PCNAP12004 IGKV2D-19-201ENST00000523346 262 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.61□□□□□ -1.83
PCNAP12004 DEFB108D-201ENST00000527787 222 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.61□□□□□ -1.83
PCNAP12004 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.61□□□□□ -1.83
PCNAP12004 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.61□□□□□ -1.83
PCNAP12004 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.61□□□□□ -1.83
PCNAP12004 MIR4697-201ENST00000582977 78 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AC068790.2-201ENST00000602601 557 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AC067959.1-201ENST00000604334 379 ntBASIC3.61□□□□□ -1.83
PCNAP12004 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.61□□□□□ -1.83
PCNAP12004 AL590282.1-201ENST00000610379 1136 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AC245517.5-201ENST00000611529 162 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AC005344.1-201ENST00000613391 459 ntBASIC3.61□□□□□ -1.83
PCNAP12004 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.61□□□□□ -1.83
PCNAP12004 AC009268.2-201ENST00000621925 457 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AC243312.2-201ENST00000623340 601 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AC068880.5-201ENST00000624331 290 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AL136313.1-201ENST00000624804 202 ntBASIC3.61□□□□□ -1.83
PCNAP12004 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PCNAP12004 AC244258.1-201ENST00000637553 1071 ntBASIC3.61□□□□□ -1.83
PCNAP12004 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.61□□□□□ -1.83
PCNAP12004 AC073073.2-201ENST00000609827 2578 ntBASIC3.61□□□□□ -1.83
PCNAP12004 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCNAP12004 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PCNAP12004 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.61□□□□□ -1.83
PCNAP12004 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
PCNAP12004 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCNAP12004 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCNAP12004 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
PCNAP12004 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCNAP12004 MTND5P29-201ENST00000458676 1807 ntBASIC3.6□□□□□ -1.83
PCNAP12004 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PCNAP12004 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCNAP12004 AC004925.1-201ENST00000624256 2706 ntBASIC3.6□□□□□ -1.83
PCNAP12004 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCNAP12004 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.6□□□□□ -1.83
PCNAP12004 MFSD8-236ENST00000641509 4050 ntBASIC3.6□□□□□ -1.83
PCNAP12004 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCNAP12004 RNY3P13-201ENST00000365542 102 ntBASIC3.6□□□□□ -1.83
PCNAP12004 RNU6-432P-201ENST00000384196 109 ntBASIC3.6□□□□□ -1.83
PCNAP12004 RNA5SP424-201ENST00000390988 115 ntBASIC3.6□□□□□ -1.83
PCNAP12004 MRPL42P2-201ENST00000403169 426 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AL391417.1-201ENST00000404100 426 ntBASIC3.6□□□□□ -1.83
PCNAP12004 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.6□□□□□ -1.83
PCNAP12004 AL031779.1-201ENST00000415663 330 ntBASIC3.6□□□□□ -1.83
PCNAP12004 CRYBB2P1-203ENST00000415709 538 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.6□□□□□ -1.83
PCNAP12004 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.6□□□□□ -1.83
PCNAP12004 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.6□□□□□ -1.83
PCNAP12004 RPL31P35-201ENST00000431058 377 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.6□□□□□ -1.83
PCNAP12004 AC091390.1-201ENST00000433904 331 ntBASIC3.6□□□□□ -1.83
PCNAP12004 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.6□□□□□ -1.83
PCNAP12004 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCNAP12004 AC004866.2-201ENST00000438285 481 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.6□□□□□ -1.83
PCNAP12004 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.6□□□□□ -1.83
PCNAP12004 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.6□□□□□ -1.83
PCNAP12004 AC006480.1-201ENST00000449887 378 ntBASIC3.6□□□□□ -1.83
PCNAP12004 RPS24P6-201ENST00000452670 400 ntBASIC3.6□□□□□ -1.83
PCNAP12004 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.6□□□□□ -1.83
PCNAP12004 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AL358832.1-201ENST00000497800 389 ntBASIC3.6□□□□□ -1.83
PCNAP12004 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.6□□□□□ -1.83
PCNAP12004 KLHL2P1-201ENST00000508691 521 ntBASIC3.6□□□□□ -1.83
PCNAP12004 CDC42P4-201ENST00000510507 563 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AC114797.1-201ENST00000514003 728 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AC026801.2-201ENST00000515352 425 ntBASIC3.6□□□□□ -1.83
PCNAP12004 RNU6-720P-201ENST00000516363 108 ntBASIC3.6□□□□□ -1.83
PCNAP12004 SCARNA14-201ENST00000516903 136 ntBASIC3.6□□□□□ -1.83
PCNAP12004 RNU6-1220P-201ENST00000517126 108 ntBASIC3.6□□□□□ -1.83
PCNAP12004 RNU6-1073P-201ENST00000517182 106 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AC103783.1-201ENST00000520506 373 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AP003033.1-201ENST00000527244 415 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.6□□□□□ -1.83
PCNAP12004 AC109635.4-202ENST00000531666 412 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AP000857.1-201ENST00000532151 543 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.6□□□□□ -1.83
PCNAP12004 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.6□□□□□ -1.83
PCNAP12004 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.6□□□□□ -1.83
PCNAP12004 AC006960.3-201ENST00000561845 705 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.6□□□□□ -1.83
PCNAP12004 RN7SL703P-201ENST00000578485 302 ntBASIC3.6□□□□□ -1.83
PCNAP12004 DEFB131E-202ENST00000602581 683 ntBASIC3.6□□□□□ -1.83
PCNAP12004 DUXAP4-201ENST00000603046 613 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AP000860.1-201ENST00000605250 559 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AC004492.1-201ENST00000607036 742 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AC006338.1-201ENST00000618453 749 ntBASIC3.6□□□□□ -1.83
PCNAP12004 AC019226.1-201ENST00000625666 515 ntBASIC3.6□□□□□ -1.83
PCNAP12004 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.6□□□□□ -1.83
PCNAP12004 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCNAP12004 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCNAP12004 FARSBP1-201ENST00000435808 1778 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms