Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC012603.1-201ENST00000606424 528 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 AC012409.4-201ENST00000612923 249 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 AC004696.1-201ENST00000614345 607 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 EIF2AP4-201ENST00000424793 1781 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 ASNSP1-201ENST00000518311 1939 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 SNORA62.1-201ENST00000364287 154 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 RNU1-64P-201ENST00000365443 163 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 MIR659-201ENST00000384963 97 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 RNU2-36P-201ENST00000410361 191 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AC011933.1-201ENST00000413334 321 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AC011998.1-201ENST00000433403 117 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AL118520.1-201ENST00000450770 291 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 IFNWP4-201ENST00000453148 294 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AC234775.1-201ENST00000454247 670 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AC005008.1-201ENST00000456151 612 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 RNU7-182P-201ENST00000459009 62 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AC116533.1-201ENST00000459748 321 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AC128713.1-201ENST00000471495 306 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 RPL23AP11-201ENST00000475260 469 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 RPS27P27-201ENST00000498779 255 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 RN7SKP40-201ENST00000517211 242 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 MIR2116-201ENST00000517221 80 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AC087854.1-201ENST00000519706 414 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 MRPL49P2-201ENST00000521066 465 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 DEFB108D-201ENST00000527787 222 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AC109635.4-202ENST00000531666 412 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AC106785.1-201ENST00000565935 262 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 AC107871.2-201ENST00000612894 502 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 BX005214.3-202ENST00000619809 325 ntBASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.2□□□□□ -1.42
CSB-PGBD3P0DP91 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AL139276.1-201ENST00000311910 1001 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 Y_RNA.455-201ENST00000384230 98 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 RNY1P14-201ENST00000384426 108 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 RNU6-754P-201ENST00000391166 107 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AL590762.2-201ENST00000395798 571 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 SOD2P1-201ENST00000396543 562 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 RNU4-78P-201ENST00000410940 126 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC005094.1-201ENST00000440420 368 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 MRPL48P1-201ENST00000445390 636 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AL590399.6-201ENST00000446396 307 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC007967.1-201ENST00000455422 1159 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC113195.1-201ENST00000579952 141 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 MIR3672-201ENST00000584290 82 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 BNIP3P16-201ENST00000589779 534 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC006157.1-201ENST00000611750 366 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 RNA5SP439-201ENST00000617595 124 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AL445567.2-201ENST00000618935 498 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 AC098657.3-201ENST00000620434 263 ntBASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CSB-PGBD3P0DP91 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 MIR133A2-201ENST00000347538 102 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 Y_RNA.463-201ENST00000384271 102 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 Y_RNA.482-201ENST00000384377 111 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 MIR134-201ENST00000385258 73 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 RN7SKP159-201ENST00000410657 292 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 VDAC1P9-201ENST00000412766 841 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms