Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.63□□□□□ -2.15
CXCL1P09341 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
CXCL1P09341 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.63□□□□□ -2.15
CXCL1P09341 MTCO1P40-201ENST00000574371 625 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 MIR4429-201ENST00000580105 73 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 VN1R92P-201ENST00000598511 928 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 AC007179.3-201ENST00000604976 235 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.63□□□□□ -2.15
CXCL1P09341 AC096577.2-201ENST00000611455 153 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 AC093838.1-201ENST00000613014 469 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.63□□□□□ -2.15
CXCL1P09341 AL590396.2-201ENST00000636511 1041 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
CXCL1P09341 AC010329.5-201ENST00000623497 2174 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.62□□□□□ -2.15
CXCL1P09341 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.62□□□□□ -2.15
CXCL1P09341 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CXCL1P09341 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CXCL1P09341 RNA5SP27-201ENST00000363839 119 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 SNORA67.4-201ENST00000384688 142 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.62□□□□□ -2.15
CXCL1P09341 RAC1P7-201ENST00000445367 377 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 AC009237.8-201ENST00000445492 379 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.62□□□□□ -2.15
CXCL1P09341 AC092155.2-201ENST00000454675 477 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 RPS3P1-201ENST00000456781 192 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.62□□□□□ -2.15
CXCL1P09341 OR9N1P-202ENST00000494289 481 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 AC097462.2-201ENST00000504623 481 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 AC023141.11-201ENST00000508864 202 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 COL6A4P2-205ENST00000509855 506 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 HMGN1P28-201ENST00000521340 364 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 GTF3AP2-201ENST00000557014 266 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 ATP5F1P7-201ENST00000567330 760 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 BX322635.1-201ENST00000605804 496 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 AC107214.2-201ENST00000608204 634 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 AL442067.2-201ENST00000614033 363 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 AL590099.1-201ENST00000615276 138 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 AC104307.1-201ENST00000616142 196 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.62□□□□□ -2.15
CXCL1P09341 AC090617.9-201ENST00000623751 147 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 AL137790.1-201ENST00000634283 177 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 OR5H6-203ENST00000642105 978 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.62□□□□□ -2.15
CXCL1P09341 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CXCL1P09341 Z99496.1-201ENST00000469424 1477 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 DDX10P1-201ENST00000448545 1933 ntBASIC1.62□□□□□ -2.15
CXCL1P09341 MTND4P35-201ENST00000604257 1375 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.61□□□□□ -2.15
CXCL1P09341 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.61□□□□□ -2.15
CXCL1P09341 AC062016.1-201ENST00000355719 319 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 RNU6-40P-201ENST00000384254 107 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AL445529.1-201ENST00000398713 389 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AL024474.1-201ENST00000404655 591 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 RNA5SP184-201ENST00000411071 108 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 UBE2V1P11-201ENST00000411559 285 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 NPM1P11-201ENST00000417106 855 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.61□□□□□ -2.15
CXCL1P09341 AC099548.1-201ENST00000421443 426 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 NDUFB4P7-201ENST00000423198 363 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.61□□□□□ -2.15
CXCL1P09341 HMGN2P19-201ENST00000425149 265 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.61□□□□□ -2.15
CXCL1P09341 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.61□□□□□ -2.15
CXCL1P09341 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.61□□□□□ -2.15
CXCL1P09341 USP9YP8-201ENST00000441913 500 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 XKRY2-201ENST00000442362 1093 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 GPM6BP3-201ENST00000442797 145 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AL136380.1-201ENST00000447970 162 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 EEF1B2P7-201ENST00000451177 676 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.61□□□□□ -2.15
CXCL1P09341 MTCO3P2-201ENST00000457365 171 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.61□□□□□ -2.15
CXCL1P09341 AC006499.2-201ENST00000513470 337 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 SNORA48.10-201ENST00000516965 160 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CXCL1P09341 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.61□□□□□ -2.15
CXCL1P09341 MTCYBP20-201ENST00000524239 1129 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.61□□□□□ -2.15
CXCL1P09341 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.61□□□□□ -2.15
CXCL1P09341 SNORD39.3-201ENST00000584451 71 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AC015688.2-201ENST00000584523 262 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AL451007.1-201ENST00000595491 289 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AL355877.2-201ENST00000603670 358 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.61□□□□□ -2.15
CXCL1P09341 MIR6817-201ENST00000615588 66 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 AC090132.2-201ENST00000615881 347 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 CTSLP2-204ENST00000629029 392 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CXCL1P09341 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CXCL1P09341 CCT4P2-201ENST00000233836 1548 ntBASIC1.61□□□□□ -2.15
CXCL1P09341 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CXCL1P09341 MIR196B-201ENST00000384852 84 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 SNORA46.1-201ENST00000391069 153 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 RNU6-77P-201ENST00000410554 91 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 AC107081.1-201ENST00000414975 361 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 Z85995.1-201ENST00000415547 335 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 NUP35P1-201ENST00000422734 947 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms