Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.1□□□□□ -1.75
RHOP08100 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.1□□□□□ -1.75
RHOP08100 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.1□□□□□ -1.75
RHOP08100 RPL21P11-201ENST00000461458 483 ntBASIC4.1□□□□□ -1.75
RHOP08100 RPL7P49-201ENST00000471402 708 ntBASIC4.1□□□□□ -1.75
RHOP08100 S100A11P1-201ENST00000477525 312 ntBASIC4.1□□□□□ -1.75
RHOP08100 RN7SL271P-201ENST00000487601 295 ntBASIC4.1□□□□□ -1.75
RHOP08100 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
RHOP08100 COX7A2P2-201ENST00000505291 250 ntBASIC4.1□□□□□ -1.75
RHOP08100 AC021146.1-201ENST00000511202 716 ntBASIC4.1□□□□□ -1.75
RHOP08100 RN7SKP277-201ENST00000516895 283 ntBASIC4.1□□□□□ -1.75
RHOP08100 RNU6-410P-201ENST00000517006 107 ntBASIC4.1□□□□□ -1.75
RHOP08100 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.1□□□□□ -1.75
RHOP08100 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.1□□□□□ -1.75
RHOP08100 OR4R3P-201ENST00000525084 838 ntBASIC4.1□□□□□ -1.75
RHOP08100 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.1□□□□□ -1.75
RHOP08100 HIF1AP1-201ENST00000553642 175 ntBASIC4.1□□□□□ -1.75
RHOP08100 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.1□□□□□ -1.75
RHOP08100 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.1□□□□□ -1.75
RHOP08100 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.1□□□□□ -1.75
RHOP08100 AC105224.1-201ENST00000587055 421 ntBASIC4.1□□□□□ -1.75
RHOP08100 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.1□□□□□ -1.75
RHOP08100 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.1□□□□□ -1.75
RHOP08100 AC024614.3-201ENST00000637860 256 ntBASIC4.1□□□□□ -1.75
RHOP08100 MARK2P15-201ENST00000432204 2186 ntBASIC4.1□□□□□ -1.75
RHOP08100 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.1□□□□□ -1.75
RHOP08100 ZNF680P1-201ENST00000436625 1469 ntBASIC4.1□□□□□ -1.75
RHOP08100 AL359893.1-201ENST00000447628 1580 ntBASIC4.1□□□□□ -1.75
RHOP08100 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
RHOP08100 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.09□□□□□ -1.75
RHOP08100 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RHOP08100 AC068254.2-201ENST00000623938 3577 ntBASIC4.09□□□□□ -1.75
RHOP08100 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RHOP08100 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.09□□□□□ -1.75
RHOP08100 U1.1-201ENST00000384101 164 ntBASIC4.09□□□□□ -1.75
RHOP08100 RNU6-339P-201ENST00000384310 107 ntBASIC4.09□□□□□ -1.75
RHOP08100 SNORA70E-201ENST00000384492 135 ntBASIC4.09□□□□□ -1.75
RHOP08100 MIR19A-201ENST00000384878 82 ntBASIC4.09□□□□□ -1.75
RHOP08100 MIR153-1-201ENST00000384914 90 ntBASIC4.09□□□□□ -1.75
RHOP08100 MIR708-201ENST00000390708 88 ntBASIC4.09□□□□□ -1.75
RHOP08100 MIR1251-201ENST00000408552 70 ntBASIC4.09□□□□□ -1.75
RHOP08100 RPL7AP73-201ENST00000413490 353 ntBASIC4.09□□□□□ -1.75
RHOP08100 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.09□□□□□ -1.75
RHOP08100 RPS12P5-201ENST00000423449 371 ntBASIC4.09□□□□□ -1.75
RHOP08100 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.09□□□□□ -1.75
RHOP08100 AL606489.2-201ENST00000433886 234 ntBASIC4.09□□□□□ -1.75
RHOP08100 RPS15AP9-201ENST00000439856 381 ntBASIC4.09□□□□□ -1.75
RHOP08100 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.09□□□□□ -1.75
RHOP08100 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.09□□□□□ -1.75
RHOP08100 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.09□□□□□ -1.75
RHOP08100 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.09□□□□□ -1.75
RHOP08100 AC010469.1-201ENST00000463864 576 ntBASIC4.09□□□□□ -1.75
RHOP08100 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.09□□□□□ -1.75
RHOP08100 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.09□□□□□ -1.75
RHOP08100 MTCO3P44-201ENST00000510977 541 ntBASIC4.09□□□□□ -1.75
RHOP08100 LRRC34P2-201ENST00000514850 553 ntBASIC4.09□□□□□ -1.75
RHOP08100 SCARNA24.1-201ENST00000516465 137 ntBASIC4.09□□□□□ -1.75
RHOP08100 SCARNA14-201ENST00000516903 136 ntBASIC4.09□□□□□ -1.75
RHOP08100 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.09□□□□□ -1.75
RHOP08100 AC087369.1-201ENST00000520775 996 ntBASIC4.09□□□□□ -1.75
RHOP08100 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.09□□□□□ -1.75
RHOP08100 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.09□□□□□ -1.75
RHOP08100 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.09□□□□□ -1.75
RHOP08100 AC034105.3-201ENST00000565294 442 ntBASIC4.09□□□□□ -1.75
RHOP08100 AC022968.1-201ENST00000567372 442 ntBASIC4.09□□□□□ -1.75
RHOP08100 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.09□□□□□ -1.75
RHOP08100 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.09□□□□□ -1.75
RHOP08100 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.09□□□□□ -1.75
RHOP08100 AC087045.1-201ENST00000605856 382 ntBASIC4.09□□□□□ -1.75
RHOP08100 AC012314.7-201ENST00000619693 93 ntBASIC4.09□□□□□ -1.75
RHOP08100 AC002550.2-201ENST00000621246 394 ntBASIC4.09□□□□□ -1.75
RHOP08100 AC010338.1-201ENST00000621823 717 ntBASIC4.09□□□□□ -1.75
RHOP08100 AC024940.5-201ENST00000622889 474 ntBASIC4.09□□□□□ -1.75
RHOP08100 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.09□□□□□ -1.76
RHOP08100 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.09□□□□□ -1.76
RHOP08100 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RHOP08100 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RHOP08100 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RHOP08100 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.08□□□□□ -1.76
RHOP08100 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
RHOP08100 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
RHOP08100 Y_RNA.157-201ENST00000363638 102 ntBASIC4.08□□□□□ -1.76
RHOP08100 SNORA69-201ENST00000383895 132 ntBASIC4.08□□□□□ -1.76
RHOP08100 RNU6-74P-201ENST00000384235 107 ntBASIC4.08□□□□□ -1.76
RHOP08100 OR9R1P-201ENST00000412200 877 ntBASIC4.08□□□□□ -1.76
RHOP08100 EIF4EP1-201ENST00000422311 642 ntBASIC4.08□□□□□ -1.76
RHOP08100 AL591419.1-201ENST00000427423 339 ntBASIC4.08□□□□□ -1.76
RHOP08100 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.08□□□□□ -1.76
RHOP08100 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RHOP08100 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.08□□□□□ -1.76
RHOP08100 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.08□□□□□ -1.76
RHOP08100 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RHOP08100 PPIAP3-201ENST00000450588 505 ntBASIC4.08□□□□□ -1.76
RHOP08100 FGF7P3-201ENST00000454645 303 ntBASIC4.08□□□□□ -1.76
RHOP08100 AL356010.1-201ENST00000456364 102 ntBASIC4.08□□□□□ -1.76
RHOP08100 UBDP1-202ENST00000457888 382 ntBASIC4.08□□□□□ -1.76
RHOP08100 RPL37P6-202ENST00000464216 403 ntBASIC4.08□□□□□ -1.76
RHOP08100 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.08□□□□□ -1.76
RHOP08100 PCBP2P3-201ENST00000509726 843 ntBASIC4.08□□□□□ -1.76
RHOP08100 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms