Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.76□□□□□ -2.13
CTSDP07339 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.76□□□□□ -2.13
CTSDP07339 MTND2P6-201ENST00000455337 1030 ntBASIC1.76□□□□□ -2.13
CTSDP07339 AC078857.1-201ENST00000469870 667 ntBASIC1.76□□□□□ -2.13
CTSDP07339 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.76□□□□□ -2.13
CTSDP07339 OR5BM1P-201ENST00000512021 366 ntBASIC1.76□□□□□ -2.13
CTSDP07339 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
CTSDP07339 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.76□□□□□ -2.13
CTSDP07339 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.76□□□□□ -2.13
CTSDP07339 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.76□□□□□ -2.13
CTSDP07339 ZNF705CP-201ENST00000530515 889 ntBASIC1.76□□□□□ -2.13
CTSDP07339 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.76□□□□□ -2.13
CTSDP07339 AC011260.1-201ENST00000578420 472 ntBASIC1.76□□□□□ -2.13
CTSDP07339 MIR3935-201ENST00000583472 104 ntBASIC1.76□□□□□ -2.13
CTSDP07339 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.76□□□□□ -2.13
CTSDP07339 OR1M4P-201ENST00000589199 287 ntBASIC1.76□□□□□ -2.13
CTSDP07339 AC079089.3-201ENST00000603094 673 ntBASIC1.76□□□□□ -2.13
CTSDP07339 AC007938.3-201ENST00000604965 623 ntBASIC1.76□□□□□ -2.13
CTSDP07339 AC012443.1-201ENST00000605605 231 ntBASIC1.76□□□□□ -2.13
CTSDP07339 AP002826.1-201ENST00000608835 315 ntBASIC1.76□□□□□ -2.13
CTSDP07339 DUXAP9-208ENST00000622815 614 ntBASIC1.76□□□□□ -2.13
CTSDP07339 AC027309.3-201ENST00000623419 351 ntBASIC1.76□□□□□ -2.13
CTSDP07339 AC012640.5-201ENST00000623897 319 ntBASIC1.76□□□□□ -2.13
CTSDP07339 AL359851.1-201ENST00000569460 4997 ntBASIC1.76□□□□□ -2.13
CTSDP07339 AC022336.2-201ENST00000568966 2538 ntBASIC1.76□□□□□ -2.13
CTSDP07339 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.75□□□□□ -2.13
CTSDP07339 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.75□□□□□ -2.13
CTSDP07339 MIR449A-201ENST00000362113 91 ntBASIC1.75□□□□□ -2.13
CTSDP07339 RNA5SP289-201ENST00000362332 137 ntBASIC1.75□□□□□ -2.13
CTSDP07339 RNU4-82P-201ENST00000362443 140 ntBASIC1.75□□□□□ -2.13
CTSDP07339 Y_RNA.500-201ENST00000384466 111 ntBASIC1.75□□□□□ -2.13
CTSDP07339 RNU6-1005P-201ENST00000384519 107 ntBASIC1.75□□□□□ -2.13
CTSDP07339 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CTSDP07339 AL121978.1-201ENST00000402778 359 ntBASIC1.75□□□□□ -2.13
CTSDP07339 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.75□□□□□ -2.13
CTSDP07339 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.75□□□□□ -2.13
CTSDP07339 AC012497.1-201ENST00000429392 575 ntBASIC1.75□□□□□ -2.13
CTSDP07339 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.75□□□□□ -2.13
CTSDP07339 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.75□□□□□ -2.13
CTSDP07339 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.75□□□□□ -2.13
CTSDP07339 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.75□□□□□ -2.13
CTSDP07339 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.75□□□□□ -2.13
CTSDP07339 AC092170.1-201ENST00000440211 356 ntBASIC1.75□□□□□ -2.13
CTSDP07339 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.75□□□□□ -2.13
CTSDP07339 AC092798.1-201ENST00000458542 409 ntBASIC1.75□□□□□ -2.13
CTSDP07339 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.75□□□□□ -2.13
CTSDP07339 FAM172BP-201ENST00000487497 1089 ntBASIC1.75□□□□□ -2.13
CTSDP07339 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.75□□□□□ -2.13
CTSDP07339 AC093767.1-201ENST00000504523 156 ntBASIC1.75□□□□□ -2.13
CTSDP07339 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.75□□□□□ -2.13
CTSDP07339 SCARNA16.3-201ENST00000516595 184 ntBASIC1.75□□□□□ -2.13
CTSDP07339 RNA5SP364-201ENST00000516938 78 ntBASIC1.75□□□□□ -2.13
CTSDP07339 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.75□□□□□ -2.13
CTSDP07339 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.75□□□□□ -2.13
CTSDP07339 OR11H5P-201ENST00000554039 926 ntBASIC1.75□□□□□ -2.13
CTSDP07339 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.75□□□□□ -2.13
CTSDP07339 AC233266.2-201ENST00000567067 528 ntBASIC1.75□□□□□ -2.13
CTSDP07339 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.75□□□□□ -2.13
CTSDP07339 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
CTSDP07339 AC098657.3-201ENST00000620434 263 ntBASIC1.75□□□□□ -2.13
CTSDP07339 uc_338.20-201ENST00000621563 178 ntBASIC1.75□□□□□ -2.13
CTSDP07339 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CTSDP07339 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.75□□□□□ -2.13
CTSDP07339 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CTSDP07339 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.75□□□□□ -2.13
CTSDP07339 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CTSDP07339 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CTSDP07339 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CTSDP07339 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CTSDP07339 AL513475.1-201ENST00000406602 315 ntBASIC1.74□□□□□ -2.13
CTSDP07339 RNU2-40P-201ENST00000410833 196 ntBASIC1.74□□□□□ -2.13
CTSDP07339 AL133384.1-201ENST00000412744 351 ntBASIC1.74□□□□□ -2.13
CTSDP07339 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.74□□□□□ -2.13
CTSDP07339 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.74□□□□□ -2.13
CTSDP07339 OR51A3P-201ENST00000413596 924 ntBASIC1.74□□□□□ -2.13
CTSDP07339 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.74□□□□□ -2.13
CTSDP07339 AC234781.2-201ENST00000426370 994 ntBASIC1.74□□□□□ -2.13
CTSDP07339 MYL8P-204ENST00000431574 518 ntBASIC1.74□□□□□ -2.13
CTSDP07339 AC236972.1-201ENST00000433225 199 ntBASIC1.74□□□□□ -2.13
CTSDP07339 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.74□□□□□ -2.13
CTSDP07339 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.74□□□□□ -2.13
CTSDP07339 RPL23AP16-201ENST00000441715 421 ntBASIC1.74□□□□□ -2.13
CTSDP07339 GPM6BP3-201ENST00000442797 145 ntBASIC1.74□□□□□ -2.13
CTSDP07339 RNF2P1-201ENST00000442955 1010 ntBASIC1.74□□□□□ -2.13
CTSDP07339 HIGD1AP2-201ENST00000446367 280 ntBASIC1.74□□□□□ -2.13
CTSDP07339 AL929288.2-201ENST00000446368 407 ntBASIC1.74□□□□□ -2.13
CTSDP07339 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.74□□□□□ -2.13
CTSDP07339 EEF1B2P7-201ENST00000451177 676 ntBASIC1.74□□□□□ -2.13
CTSDP07339 AC233279.1-201ENST00000455300 423 ntBASIC1.74□□□□□ -2.13
CTSDP07339 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.74□□□□□ -2.13
CTSDP07339 RNU6-27P-201ENST00000516146 107 ntBASIC1.74□□□□□ -2.13
CTSDP07339 RNU6-416P-201ENST00000516265 103 ntBASIC1.74□□□□□ -2.13
CTSDP07339 RNA5SP281-201ENST00000516504 135 ntBASIC1.74□□□□□ -2.13
CTSDP07339 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.74□□□□□ -2.13
CTSDP07339 AC103833.1-201ENST00000517442 172 ntBASIC1.74□□□□□ -2.13
CTSDP07339 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.74□□□□□ -2.13
CTSDP07339 OR5AQ1P-201ENST00000527596 927 ntBASIC1.74□□□□□ -2.13
CTSDP07339 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.74□□□□□ -2.13
CTSDP07339 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.74□□□□□ -2.13
CTSDP07339 SNORD39.3-201ENST00000584451 71 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms