Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC007494.3-201ENST00000624660 743 ntBASIC3.62□□□□□ -1.83
RB1P06400 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RB1P06400 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.62□□□□□ -1.83
RB1P06400 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
RB1P06400 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.62□□□□□ -1.83
RB1P06400 AC012321.1-201ENST00000561622 1588 ntBASIC3.62□□□□□ -1.83
RB1P06400 AF117829.1-206ENST00000621883 3802 ntBASIC3.62□□□□□ -1.83
RB1P06400 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
RB1P06400 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RB1P06400 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RB1P06400 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RB1P06400 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.61□□□□□ -1.83
RB1P06400 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.61□□□□□ -1.83
RB1P06400 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RB1P06400 RNY4P24-201ENST00000362735 96 ntBASIC3.61□□□□□ -1.83
RB1P06400 RNU5F-6P-201ENST00000362979 116 ntBASIC3.61□□□□□ -1.83
RB1P06400 RNU1-140P-201ENST00000365040 165 ntBASIC3.61□□□□□ -1.83
RB1P06400 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
RB1P06400 AL138885.1-201ENST00000405921 675 ntBASIC3.61□□□□□ -1.83
RB1P06400 HSPE1P8-201ENST00000406997 288 ntBASIC3.61□□□□□ -1.83
RB1P06400 MTND1P21-201ENST00000412991 285 ntBASIC3.61□□□□□ -1.83
RB1P06400 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.61□□□□□ -1.83
RB1P06400 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.61□□□□□ -1.83
RB1P06400 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.61□□□□□ -1.83
RB1P06400 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.61□□□□□ -1.83
RB1P06400 HMGN2P20-201ENST00000437531 273 ntBASIC3.61□□□□□ -1.83
RB1P06400 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.61□□□□□ -1.83
RB1P06400 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.61□□□□□ -1.83
RB1P06400 NANOGNBP1-201ENST00000448444 480 ntBASIC3.61□□□□□ -1.83
RB1P06400 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.61□□□□□ -1.83
RB1P06400 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.61□□□□□ -1.83
RB1P06400 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.61□□□□□ -1.83
RB1P06400 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.61□□□□□ -1.83
RB1P06400 AC118465.1-201ENST00000513820 1271 ntBASIC3.61□□□□□ -1.83
RB1P06400 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.61□□□□□ -1.83
RB1P06400 RNU6-1231P-201ENST00000517185 103 ntBASIC3.61□□□□□ -1.83
RB1P06400 AC087373.1-201ENST00000524920 491 ntBASIC3.61□□□□□ -1.83
RB1P06400 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RB1P06400 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.61□□□□□ -1.83
RB1P06400 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.61□□□□□ -1.83
RB1P06400 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.61□□□□□ -1.83
RB1P06400 AC125611.2-201ENST00000551907 647 ntBASIC3.61□□□□□ -1.83
RB1P06400 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.61□□□□□ -1.83
RB1P06400 AP001029.3-201ENST00000588063 596 ntBASIC3.61□□□□□ -1.83
RB1P06400 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.61□□□□□ -1.83
RB1P06400 AC092354.1-201ENST00000606057 376 ntBASIC3.61□□□□□ -1.83
RB1P06400 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.61□□□□□ -1.83
RB1P06400 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RB1P06400 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.6□□□□□ -1.83
RB1P06400 PABPC1P9-201ENST00000426076 1612 ntBASIC3.6□□□□□ -1.83
RB1P06400 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RB1P06400 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RB1P06400 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RB1P06400 RNU6-7-201ENST00000364784 107 ntBASIC3.6□□□□□ -1.83
RB1P06400 RNU6-8-201ENST00000365467 107 ntBASIC3.6□□□□□ -1.83
RB1P06400 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RB1P06400 SKINT1L-201ENST00000401057 817 ntBASIC3.6□□□□□ -1.83
RB1P06400 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.6□□□□□ -1.83
RB1P06400 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RB1P06400 AC006989.1-201ENST00000427212 131 ntBASIC3.6□□□□□ -1.83
RB1P06400 SKP1P1-201ENST00000438081 489 ntBASIC3.6□□□□□ -1.83
RB1P06400 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.6□□□□□ -1.83
RB1P06400 RABEPKP1-201ENST00000440529 1026 ntBASIC3.6□□□□□ -1.83
RB1P06400 MTND1P30-201ENST00000441241 901 ntBASIC3.6□□□□□ -1.83
RB1P06400 GDI2P2-201ENST00000445131 608 ntBASIC3.6□□□□□ -1.83
RB1P06400 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.6□□□□□ -1.83
RB1P06400 AC092754.2-201ENST00000463506 460 ntBASIC3.6□□□□□ -1.83
RB1P06400 MTND3P7-201ENST00000474435 343 ntBASIC3.6□□□□□ -1.83
RB1P06400 AC109486.1-201ENST00000486833 374 ntBASIC3.6□□□□□ -1.83
RB1P06400 AC096576.1-201ENST00000489014 359 ntBASIC3.6□□□□□ -1.83
RB1P06400 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.6□□□□□ -1.83
RB1P06400 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.6□□□□□ -1.83
RB1P06400 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.6□□□□□ -1.83
RB1P06400 RNU6-798P-201ENST00000516912 103 ntBASIC3.6□□□□□ -1.83
RB1P06400 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.6□□□□□ -1.83
RB1P06400 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RB1P06400 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.6□□□□□ -1.83
RB1P06400 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.6□□□□□ -1.83
RB1P06400 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.6□□□□□ -1.83
RB1P06400 AP005205.1-201ENST00000563503 508 ntBASIC3.6□□□□□ -1.83
RB1P06400 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RB1P06400 TPMTP1-201ENST00000592307 737 ntBASIC3.6□□□□□ -1.83
RB1P06400 AC121247.2-201ENST00000604776 136 ntBASIC3.6□□□□□ -1.83
RB1P06400 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.6□□□□□ -1.83
RB1P06400 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.6□□□□□ -1.83
RB1P06400 AC093732.2-201ENST00000607950 274 ntBASIC3.6□□□□□ -1.83
RB1P06400 AC026422.1-201ENST00000623961 452 ntBASIC3.6□□□□□ -1.83
RB1P06400 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.6□□□□□ -1.83
RB1P06400 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.6□□□□□ -1.83
RB1P06400 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RB1P06400 AC005183.1-201ENST00000603687 1979 ntBASIC3.6□□□□□ -1.83
RB1P06400 AC006504.1-201ENST00000562493 3666 ntBASIC3.59□□□□□ -1.83
RB1P06400 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RB1P06400 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.59□□□□□ -1.83
RB1P06400 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RB1P06400 RNU5E-8P-201ENST00000363502 116 ntBASIC3.59□□□□□ -1.83
RB1P06400 RNA5SP42-201ENST00000364278 115 ntBASIC3.59□□□□□ -1.83
RB1P06400 RNU6-76P-201ENST00000384060 104 ntBASIC3.59□□□□□ -1.83
RB1P06400 RNU6-516P-201ENST00000411381 104 ntBASIC3.59□□□□□ -1.83
RB1P06400 RPL7P8-201ENST00000411964 730 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms