Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC008962.1-201ENST00000605729 304 ntBASIC2.09□□□□□ -2.07
COL1A1P02452 BX248123.2-201ENST00000606318 124 ntBASIC2.09□□□□□ -2.07
COL1A1P02452 MIR6504-201ENST00000613520 61 ntBASIC2.09□□□□□ -2.07
COL1A1P02452 DUXAP9-208ENST00000622815 614 ntBASIC2.09□□□□□ -2.07
COL1A1P02452 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
COL1A1P02452 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.09□□□□□ -2.08
COL1A1P02452 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.08□□□□□ -2.08
COL1A1P02452 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.08□□□□□ -2.08
COL1A1P02452 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.08□□□□□ -2.08
COL1A1P02452 RNU2-68P-201ENST00000410878 191 ntBASIC2.08□□□□□ -2.08
COL1A1P02452 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.08□□□□□ -2.08
COL1A1P02452 NDUFA5P10-201ENST00000432147 357 ntBASIC2.08□□□□□ -2.08
COL1A1P02452 RPS26P56-201ENST00000444468 240 ntBASIC2.08□□□□□ -2.08
COL1A1P02452 RPL21P131-201ENST00000497298 483 ntBASIC2.08□□□□□ -2.08
COL1A1P02452 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.08□□□□□ -2.08
COL1A1P02452 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.08□□□□□ -2.08
COL1A1P02452 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.08□□□□□ -2.08
COL1A1P02452 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.08□□□□□ -2.08
COL1A1P02452 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.08□□□□□ -2.08
COL1A1P02452 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
COL1A1P02452 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.08□□□□□ -2.08
COL1A1P02452 SNHG22-203ENST00000617833 660 ntBASIC2.08□□□□□ -2.08
COL1A1P02452 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL1A1P02452 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL1A1P02452 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL1A1P02452 SNORD114-26-201ENST00000363543 72 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL1A1P02452 Z98749.2-208ENST00000381646 500 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL1A1P02452 RNU4-74P-201ENST00000411280 161 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 AC023512.1-201ENST00000444513 499 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 AL121594.1-201ENST00000475906 575 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 AC022690.1-201ENST00000526681 550 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 MIR4419B-201ENST00000577260 68 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 AC007275.1-201ENST00000621243 671 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 AC006963.1-201ENST00000624003 1052 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.07□□□□□ -2.08
COL1A1P02452 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
COL1A1P02452 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL1A1P02452 PABPC1P7-201ENST00000413177 1513 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 SNORD48-201ENST00000364953 64 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 RNA5SP492-201ENST00000411330 114 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 RPL26P37-201ENST00000411983 438 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.07□□□□□ -2.08
COL1A1P02452 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.07□□□□□ -2.08
COL1A1P02452 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.07□□□□□ -2.08
COL1A1P02452 USP9YP10-201ENST00000454868 628 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 RNU7-95P-201ENST00000459222 64 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 AC009901.1-201ENST00000506703 541 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.07□□□□□ -2.08
COL1A1P02452 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.07□□□□□ -2.08
COL1A1P02452 MTCYBP37-201ENST00000510642 1133 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.07□□□□□ -2.08
COL1A1P02452 RN7SKP40-201ENST00000517211 242 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.07□□□□□ -2.08
COL1A1P02452 OSBPL9P3-201ENST00000534523 595 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 AL354943.1-201ENST00000572103 781 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
COL1A1P02452 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.07□□□□□ -2.08
COL1A1P02452 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.07□□□□□ -2.08
COL1A1P02452 WISP1-OT1-201ENST00000602893 642 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 AC019159.1-201ENST00000605094 187 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 AL590410.1-201ENST00000617925 333 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL1A1P02452 LINC00216-201ENST00000623548 1126 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 AC020923.1-201ENST00000624021 917 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 HPVC1-201ENST00000629899 1198 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 FO624990.1-201ENST00000636373 85 ntBASIC2.07□□□□□ -2.08
COL1A1P02452 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.06□□□□□ -2.08
COL1A1P02452 Z82209.1-201ENST00000422141 2135 ntBASIC2.06□□□□□ -2.08
COL1A1P02452 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
COL1A1P02452 UBE2L2-201ENST00000254302 429 ntBASIC2.06□□□□□ -2.08
COL1A1P02452 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL1A1P02452 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COL1A1P02452 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL1A1P02452 FO393413.1-201ENST00000402892 195 ntBASIC2.06□□□□□ -2.08
COL1A1P02452 RPS7P9-201ENST00000414704 586 ntBASIC2.06□□□□□ -2.08
COL1A1P02452 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.06□□□□□ -2.08
COL1A1P02452 RABEPKP1-201ENST00000440529 1026 ntBASIC2.06□□□□□ -2.08
COL1A1P02452 Z73417.1-201ENST00000447373 778 ntBASIC2.06□□□□□ -2.08
COL1A1P02452 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.06□□□□□ -2.08
COL1A1P02452 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.06□□□□□ -2.08
COL1A1P02452 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.06□□□□□ -2.08
COL1A1P02452 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.06□□□□□ -2.08
COL1A1P02452 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.06□□□□□ -2.08
COL1A1P02452 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.06□□□□□ -2.08
COL1A1P02452 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.06□□□□□ -2.08
COL1A1P02452 MIR4448-201ENST00000584360 86 ntBASIC2.06□□□□□ -2.08
COL1A1P02452 AL009028.1-201ENST00000604895 802 ntBASIC2.06□□□□□ -2.08
COL1A1P02452 AL353748.2-201ENST00000622148 471 ntBASIC2.06□□□□□ -2.08
COL1A1P02452 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.06□□□□□ -2.08
COL1A1P02452 ZNF37BP-203ENST00000452306 1352 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 SNORD56.5-201ENST00000364281 72 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 RNU1-109P-201ENST00000383960 147 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 RNU4-31P-201ENST00000384211 141 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 RNU1-57P-201ENST00000384491 166 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 SUMO2P12-201ENST00000405924 140 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.05□□□□□ -2.08
COL1A1P02452 RPS6P14-201ENST00000425165 719 ntBASIC2.05□□□□□ -2.08
COL1A1P02452 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms