Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC084290.1-201ENST00000434995 374 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AL117351.1-201ENST00000438864 766 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 RPL23AP58-201ENST00000440453 469 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 MTND3P1-201ENST00000441336 220 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC008155.2-201ENST00000464337 397 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC104472.2-201ENST00000469035 601 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 HSPE1P6-201ENST00000479457 291 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 RPL32P34-201ENST00000486380 400 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AL049874.1-201ENST00000489560 388 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC021678.1-201ENST00000505195 936 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 MIR3921-201ENST00000577308 85 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC011260.1-201ENST00000578420 472 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 PRELID3BP8-201ENST00000604148 295 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AL158042.1-201ENST00000605338 460 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AL162274.2-201ENST00000614406 332 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC090132.2-201ENST00000615881 347 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AP000484.1-201ENST00000620067 1252 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC244100.1-202ENST00000621554 382 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC027309.3-201ENST00000623419 351 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC010297.1-201ENST00000623948 149 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AP001002.2-201ENST00000625137 386 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 U6.105-201ENST00000637379 88 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 MAPK10-266ENST00000641066 6555 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 DDX43P2-201ENST00000604753 1354 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 MIR6073-201ENST00000352083 89 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 RNU5A-1-201ENST00000362698 116 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 RNU6-359P-201ENST00000365466 108 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 RNU6-744P-201ENST00000365557 107 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 CD24P4-201ENST00000382840 243 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 RNU6-1316P-201ENST00000384242 108 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 SNORA36C-201ENST00000384289 132 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 RNU6-114P-201ENST00000384704 105 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 RPS3AP26-201ENST00000398259 784 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 HMGN1P24-201ENST00000412282 298 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AL353678.1-201ENST00000422735 741 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AL159987.2-201ENST00000432754 307 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC006028.1-201ENST00000438379 402 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 SNRPGP6-201ENST00000451124 220 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC147055.4-201ENST00000504399 745 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC006445.2-201ENST00000510061 472 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC093281.2-201ENST00000510153 597 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC090136.1-201ENST00000520009 240 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 HMGB1P41-201ENST00000520234 440 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 DUXAP4-201ENST00000603046 613 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC144521.1-201ENST00000607148 956 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC097478.2-201ENST00000610572 514 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC092106.3-201ENST00000611308 722 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC004696.1-201ENST00000614345 607 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AL136981.2-201ENST00000617319 734 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AL603758.1-201ENST00000618654 241 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 MIR6130-201ENST00000619419 109 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC022960.3-201ENST00000619794 441 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 AC007318.2-201ENST00000620999 243 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms