Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC006989.1-201ENST00000427212 131 ntBASIC3.53□□□□□ -1.84
LDLRP01130 AL512649.1-201ENST00000428997 581 ntBASIC3.53□□□□□ -1.84
LDLRP01130 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.53□□□□□ -1.84
LDLRP01130 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.53□□□□□ -1.84
LDLRP01130 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.53□□□□□ -1.84
LDLRP01130 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.53□□□□□ -1.84
LDLRP01130 AP000542.1-201ENST00000448473 371 ntBASIC3.53□□□□□ -1.84
LDLRP01130 SNRPGP9-201ENST00000456025 225 ntBASIC3.53□□□□□ -1.84
LDLRP01130 AL136097.1-201ENST00000456945 913 ntBASIC3.53□□□□□ -1.84
LDLRP01130 RNU7-170P-201ENST00000459303 61 ntBASIC3.53□□□□□ -1.84
LDLRP01130 RPS29P2-201ENST00000479278 136 ntBASIC3.53□□□□□ -1.84
LDLRP01130 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.53□□□□□ -1.84
LDLRP01130 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.53□□□□□ -1.84
LDLRP01130 AC104619.4-201ENST00000510773 249 ntBASIC3.53□□□□□ -1.84
LDLRP01130 AF131216.2-201ENST00000512316 564 ntBASIC3.53□□□□□ -1.84
LDLRP01130 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDLRP01130 AC116347.2-201ENST00000514912 523 ntBASIC3.53□□□□□ -1.84
LDLRP01130 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.53□□□□□ -1.84
LDLRP01130 AC068587.4-201ENST00000533893 186 ntBASIC3.53□□□□□ -1.84
LDLRP01130 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.53□□□□□ -1.84
LDLRP01130 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.53□□□□□ -1.84
LDLRP01130 YPEL5P3-201ENST00000547227 352 ntBASIC3.53□□□□□ -1.84
LDLRP01130 AC126177.3-201ENST00000551839 688 ntBASIC3.53□□□□□ -1.84
LDLRP01130 MTCO3P24-201ENST00000572729 782 ntBASIC3.53□□□□□ -1.84
LDLRP01130 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
LDLRP01130 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.53□□□□□ -1.84
LDLRP01130 AC011468.4-201ENST00000603942 409 ntBASIC3.53□□□□□ -1.84
LDLRP01130 AC004853.1-201ENST00000604902 698 ntBASIC3.53□□□□□ -1.84
LDLRP01130 AL596245.1-201ENST00000618994 362 ntBASIC3.53□□□□□ -1.84
LDLRP01130 AC022140.2-201ENST00000623500 188 ntBASIC3.53□□□□□ -1.84
LDLRP01130 AL008636.1-201ENST00000625038 1018 ntBASIC3.53□□□□□ -1.84
LDLRP01130 CRYM-AS1-204ENST00000637983 556 ntBASIC3.53□□□□□ -1.84
LDLRP01130 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDLRP01130 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDLRP01130 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDLRP01130 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDLRP01130 RIOK3P1-201ENST00000418778 1528 ntBASIC3.53□□□□□ -1.84
LDLRP01130 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.53□□□□□ -1.84
LDLRP01130 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDLRP01130 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
LDLRP01130 AC073073.2-201ENST00000609827 2578 ntBASIC3.53□□□□□ -1.85
LDLRP01130 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LDLRP01130 AC091152.2-201ENST00000591628 2569 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
LDLRP01130 RNU6-600P-201ENST00000362524 99 ntBASIC3.52□□□□□ -1.85
LDLRP01130 RNU5F-6P-201ENST00000362979 116 ntBASIC3.52□□□□□ -1.85
LDLRP01130 Y_RNA.303-201ENST00000364998 94 ntBASIC3.52□□□□□ -1.85
LDLRP01130 RNA5SP97-201ENST00000365006 84 ntBASIC3.52□□□□□ -1.85
LDLRP01130 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.52□□□□□ -1.85
LDLRP01130 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.52□□□□□ -1.85
LDLRP01130 Y_RNA.390-201ENST00000383932 102 ntBASIC3.52□□□□□ -1.85
LDLRP01130 RNU6-1207P-201ENST00000384343 107 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AL136116.1-201ENST00000403591 381 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AP000567.1-201ENST00000406413 156 ntBASIC3.52□□□□□ -1.85
LDLRP01130 MTHFD2P2-201ENST00000407725 247 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AL035423.1-201ENST00000420331 213 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AC244098.2-201ENST00000422068 99 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.52□□□□□ -1.85
LDLRP01130 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.52□□□□□ -1.85
LDLRP01130 RSU1P2-202ENST00000437884 485 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AL121601.2-201ENST00000438019 707 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.52□□□□□ -1.85
LDLRP01130 AL662791.1-201ENST00000441992 928 ntBASIC3.52□□□□□ -1.85
LDLRP01130 RPL23AP14-201ENST00000468281 468 ntBASIC3.52□□□□□ -1.85
LDLRP01130 MTCO3P38-201ENST00000468910 766 ntBASIC3.52□□□□□ -1.85
LDLRP01130 ST13P14-201ENST00000474095 734 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AC116337.2-201ENST00000477662 156 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AC126182.1-201ENST00000478134 357 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AL049830.2-201ENST00000480072 201 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AC138853.1-201ENST00000503549 823 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AC022447.3-201ENST00000506865 495 ntBASIC3.52□□□□□ -1.85
LDLRP01130 HMGB3P15-201ENST00000507326 574 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.52□□□□□ -1.85
LDLRP01130 TXNP6-201ENST00000510190 310 ntBASIC3.52□□□□□ -1.85
LDLRP01130 RAC1P2-201ENST00000511164 579 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.52□□□□□ -1.85
LDLRP01130 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.52□□□□□ -1.85
LDLRP01130 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.52□□□□□ -1.85
LDLRP01130 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.52□□□□□ -1.85
LDLRP01130 MIR3922-201ENST00000585192 84 ntBASIC3.52□□□□□ -1.85
LDLRP01130 SNRPGP15-201ENST00000600149 222 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AC015871.2-201ENST00000603605 948 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AC091805.2-201ENST00000603848 235 ntBASIC3.52□□□□□ -1.85
LDLRP01130 LARP7P1-201ENST00000605576 316 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AC055876.5-201ENST00000605667 259 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.52□□□□□ -1.85
LDLRP01130 MIR8058-201ENST00000615737 89 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AL359314.1-201ENST00000616913 261 ntBASIC3.52□□□□□ -1.85
LDLRP01130 AC095031.1-201ENST00000623685 672 ntBASIC3.52□□□□□ -1.85
LDLRP01130 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.52□□□□□ -1.85
LDLRP01130 MIR3651-201ENST00000630427 90 ntBASIC3.52□□□□□ -1.85
LDLRP01130 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDLRP01130 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDLRP01130 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDLRP01130 CR848007.1-201ENST00000442354 1699 ntBASIC3.52□□□□□ -1.85
LDLRP01130 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDLRP01130 AC138915.3-201ENST00000562908 1389 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AL049780.3-201ENST00000624612 1583 ntBASIC3.51□□□□□ -1.85
LDLRP01130 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
LDLRP01130 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms