Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SHOX2O60902 ELF2P3-201ENST00000445099 1506 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 AC008669.1-201ENST00000565823 2178 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 ZNF849P-201ENST00000594711 1566 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SHOX2O60902 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SHOX2O60902 AP002784.2-201ENST00000397300 549 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 NPM1P10-201ENST00000398310 865 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AL356057.2-201ENST00000403318 432 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 MIR1290-201ENST00000408735 78 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 RNA5SP338-201ENST00000410495 85 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 RNU2-15P-201ENST00000410692 191 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.41□□□□□ -2.02
SHOX2O60902 FCF1P2-201ENST00000415284 583 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.41□□□□□ -2.02
SHOX2O60902 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.41□□□□□ -2.02
SHOX2O60902 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.41□□□□□ -2.02
SHOX2O60902 HMGN2P38-201ENST00000423806 265 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.41□□□□□ -2.02
SHOX2O60902 SNRPGP6-201ENST00000451124 220 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.41□□□□□ -2.02
SHOX2O60902 RFC5P1-201ENST00000454419 874 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AC010099.1-201ENST00000455434 375 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 RPL23AP49-201ENST00000492925 468 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.41□□□□□ -2.02
SHOX2O60902 AC108210.2-201ENST00000503681 201 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.41□□□□□ -2.02
SHOX2O60902 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 SNORA31.21-201ENST00000517180 77 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AC025755.1-201ENST00000521306 278 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AC026616.1-201ENST00000523157 525 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 HMGB1P14-201ENST00000557424 591 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.41□□□□□ -2.02
SHOX2O60902 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.41□□□□□ -2.02
SHOX2O60902 MTCO1P40-201ENST00000574371 625 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 MIR3921-201ENST00000577308 85 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AC002487.1-201ENST00000604565 994 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.41□□□□□ -2.02
SHOX2O60902 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SHOX2O60902 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.41□□□□□ -2.02
SHOX2O60902 AC027309.3-201ENST00000623419 351 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AC068880.5-201ENST00000624331 290 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 AC110079.1-202ENST00000635213 138 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 TPTE2P4-201ENST00000258589 1605 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SHOX2O60902 MTCO1P23-201ENST00000415223 1526 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.41□□□□□ -2.02
SHOX2O60902 ZNF658B-202ENST00000615961 3375 ntBASIC2.41□□□□□ -2.02
SHOX2O60902 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.4□□□□□ -2.02
SHOX2O60902 AC010680.1-201ENST00000590024 3590 ntBASIC2.4□□□□□ -2.02
SHOX2O60902 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SHOX2O60902 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SHOX2O60902 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SHOX2O60902 OR5J1P-201ENST00000313544 939 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 SNORA67.1-201ENST00000364749 141 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 OR1L1-202ENST00000373686 1083 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 MIR627-201ENST00000384979 97 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 RNU6-882P-201ENST00000391025 103 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.4□□□□□ -2.03
SHOX2O60902 AL445183.3-201ENST00000414168 502 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SHOX2O60902 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.4□□□□□ -2.03
SHOX2O60902 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.4□□□□□ -2.03
SHOX2O60902 AC234064.1-201ENST00000436312 247 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.4□□□□□ -2.03
SHOX2O60902 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.4□□□□□ -2.03
SHOX2O60902 AC104164.3-201ENST00000467363 1258 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AC004263.1-201ENST00000479327 332 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 RPL36AP21-201ENST00000490372 323 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AC084024.2-201ENST00000503480 791 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AC087272.1-201ENST00000523624 533 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AC068339.2-201ENST00000534395 618 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.4□□□□□ -2.03
SHOX2O60902 GTF3AP2-201ENST00000557014 266 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.4□□□□□ -2.03
SHOX2O60902 ELOCP29-201ENST00000588193 334 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AC016727.1-205ENST00000605437 569 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AC097504.2-201ENST00000608088 454 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AC013562.2-201ENST00000611632 603 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AL590808.1-201ENST00000618696 141 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.4□□□□□ -2.03
SHOX2O60902 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.4□□□□□ -2.03
SHOX2O60902 AC069528.2-201ENST00000624849 1991 ntBASIC2.4□□□□□ -2.03
SHOX2O60902 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SHOX2O60902 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SHOX2O60902 DEFB108F-201ENST00000344638 222 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 MIR16-2-201ENST00000362117 81 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 RNU6-582P-201ENST00000362989 107 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 RNU6-549P-201ENST00000384433 107 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 RNU6-878P-201ENST00000384578 110 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SHOX2O60902 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SHOX2O60902 AL356320.2-201ENST00000417263 507 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.39□□□□□ -2.03
SHOX2O60902 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.39□□□□□ -2.03
SHOX2O60902 RPL7P12-201ENST00000446719 750 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 AC245517.4-201ENST00000448601 281 ntBASIC2.39□□□□□ -2.03
SHOX2O60902 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SHOX2O60902 MTND2P30-201ENST00000456663 382 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms