Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 AL137849.1-201ENST00000604767 169 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 SNORA62.6-201ENST00000606322 83 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AP002826.1-201ENST00000608835 315 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AC103710.1-201ENST00000610003 901 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 AL110115.1-201ENST00000614396 364 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AP001506.1-201ENST00000615444 211 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AC039056.2-201ENST00000622261 511 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.39□□□□□ -1.87
SMAD9O15198 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SMAD9O15198 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMAD9O15198 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMAD9O15198 MAPK10-362ENST00000641864 4484 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMAD9O15198 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMAD9O15198 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMAD9O15198 MFSD8-236ENST00000641509 4050 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD9O15198 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD9O15198 AC092104.1-201ENST00000497346 1441 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD9O15198 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SMAD9O15198 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD9O15198 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.38□□□□□ -1.87
SMAD9O15198 GNG5P1-201ENST00000255500 204 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD9O15198 DEFB108F-201ENST00000344638 222 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 RNY4P34-201ENST00000364779 95 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 Y_RNA.359-201ENST00000365498 102 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SMAD9O15198 RNU6-297P-201ENST00000384636 107 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SMAD9O15198 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD9O15198 HLFP1-201ENST00000402375 499 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 AL591034.1-201ENST00000407447 340 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 ELOCP17-201ENST00000414751 326 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SMAD9O15198 RPS15AP12-201ENST00000419498 388 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 AC006366.1-201ENST00000422002 759 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 UBE2D3P2-201ENST00000424409 445 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD9O15198 AL445584.1-201ENST00000431451 330 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 NEK4P1-201ENST00000433383 879 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD9O15198 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD9O15198 PGBD4P3-201ENST00000440731 581 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.38□□□□□ -1.87
SMAD9O15198 MTCO2P7-201ENST00000446518 666 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 SSXP4-201ENST00000451349 245 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 AC114967.1-201ENST00000504890 259 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD9O15198 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD9O15198 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD9O15198 RNU1-61P-201ENST00000516107 151 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 Y_RNA.672-201ENST00000516289 104 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.38□□□□□ -1.87
SMAD9O15198 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.38□□□□□ -1.87
SMAD9O15198 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD9O15198 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.38□□□□□ -1.87
SMAD9O15198 AF038458.1-201ENST00000588406 262 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.38□□□□□ -1.87
SMAD9O15198 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.38□□□□□ -1.87
SMAD9O15198 AC011939.3-201ENST00000613686 466 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 AL136313.1-201ENST00000624804 202 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 AC110994.2-201ENST00000635481 492 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD9O15198 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.38□□□□□ -1.87
SMAD9O15198 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD9O15198 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD9O15198 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD9O15198 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD9O15198 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMAD9O15198 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.37□□□□□ -1.87
SMAD9O15198 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMAD9O15198 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMAD9O15198 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 RNU4-24P-201ENST00000364565 139 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 Y_RNA.333-201ENST00000365274 102 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 SNORA70.4-201ENST00000365509 134 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 RNY3P13-201ENST00000365542 102 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SMAD9O15198 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SMAD9O15198 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.37□□□□□ -1.87
SMAD9O15198 SNORA57.3-201ENST00000411095 141 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 RNA5SP107-201ENST00000411358 122 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 RPL21P24-201ENST00000413752 448 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 MORF4L1P6-201ENST00000418771 268 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 AC069157.1-201ENST00000421749 137 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 AL139247.1-201ENST00000422768 325 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.37□□□□□ -1.87
SMAD9O15198 AL589872.1-201ENST00000426602 288 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.37□□□□□ -1.87
SMAD9O15198 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.37□□□□□ -1.87
SMAD9O15198 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.37□□□□□ -1.87
SMAD9O15198 VN1R108P-201ENST00000431580 830 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 AC119618.1-201ENST00000434191 222 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 NANOGP10-201ENST00000453325 895 ntBASIC3.37□□□□□ -1.87
SMAD9O15198 AL133162.1-201ENST00000463228 453 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms