Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC106871.1-201ENST00000568324 3102 ntBASIC5.19□□□□□ -1.58
SOX1O00570 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SOX1O00570 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.19□□□□□ -1.58
SOX1O00570 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.19□□□□□ -1.58
SOX1O00570 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SOX1O00570 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX1O00570 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SOX1O00570 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SOX1O00570 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX1O00570 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.18□□□□□ -1.58
SOX1O00570 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX1O00570 RNU6-874P-201ENST00000362390 105 ntBASIC5.18□□□□□ -1.58
SOX1O00570 Y_RNA.111-201ENST00000363248 100 ntBASIC5.18□□□□□ -1.58
SOX1O00570 RNU6-715P-201ENST00000365204 103 ntBASIC5.18□□□□□ -1.58
SOX1O00570 RNU6-214P-201ENST00000384130 107 ntBASIC5.18□□□□□ -1.58
SOX1O00570 SNORA41-201ENST00000384675 132 ntBASIC5.18□□□□□ -1.58
SOX1O00570 ENSAP1-201ENST00000392855 326 ntBASIC5.18□□□□□ -1.58
SOX1O00570 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SOX1O00570 PPIAP9-201ENST00000403866 498 ntBASIC5.18□□□□□ -1.58
SOX1O00570 RNU6-55P-201ENST00000411092 107 ntBASIC5.18□□□□□ -1.58
SOX1O00570 RNU6-293P-201ENST00000411259 106 ntBASIC5.18□□□□□ -1.58
SOX1O00570 RNU6-603P-201ENST00000411403 107 ntBASIC5.18□□□□□ -1.58
SOX1O00570 TBCAP2-201ENST00000416175 326 ntBASIC5.18□□□□□ -1.58
SOX1O00570 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX1O00570 USP9YP30-201ENST00000430729 455 ntBASIC5.18□□□□□ -1.58
SOX1O00570 RPL23AP50-201ENST00000434149 455 ntBASIC5.18□□□□□ -1.58
SOX1O00570 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX1O00570 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX1O00570 AC099799.1-201ENST00000439809 192 ntBASIC5.18□□□□□ -1.58
SOX1O00570 RPL23AP33-201ENST00000442301 452 ntBASIC5.18□□□□□ -1.58
SOX1O00570 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX1O00570 SNORD125-201ENST00000459538 96 ntBASIC5.18□□□□□ -1.58
SOX1O00570 RPL23AP2-201ENST00000471227 466 ntBASIC5.18□□□□□ -1.58
SOX1O00570 UQCRHP4-201ENST00000471686 272 ntBASIC5.18□□□□□ -1.58
SOX1O00570 RNU6-408P-201ENST00000515910 100 ntBASIC5.18□□□□□ -1.58
SOX1O00570 RNU6-1143P-201ENST00000516125 104 ntBASIC5.18□□□□□ -1.58
SOX1O00570 RNA5SP384-201ENST00000516615 116 ntBASIC5.18□□□□□ -1.58
SOX1O00570 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX1O00570 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX1O00570 AC107016.1-201ENST00000550463 337 ntBASIC5.18□□□□□ -1.58
SOX1O00570 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX1O00570 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.18□□□□□ -1.58
SOX1O00570 AL158032.1-201ENST00000605401 106 ntBASIC5.18□□□□□ -1.58
SOX1O00570 TUG1_2.1-201ENST00000614234 87 ntBASIC5.18□□□□□ -1.58
SOX1O00570 AL606534.2-204ENST00000635008 178 ntBASIC5.18□□□□□ -1.58
SOX1O00570 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX1O00570 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX1O00570 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX1O00570 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX1O00570 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX1O00570 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX1O00570 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX1O00570 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX1O00570 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 AC004076.2-201ENST00000620532 3323 ntBASIC5.17□□□□□ -1.58
SOX1O00570 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX1O00570 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX1O00570 Y_RNA.39-201ENST00000362620 98 ntBASIC5.17□□□□□ -1.58
SOX1O00570 RNU6-266P-201ENST00000364225 107 ntBASIC5.17□□□□□ -1.58
SOX1O00570 RNU6-450P-201ENST00000364654 107 ntBASIC5.17□□□□□ -1.58
SOX1O00570 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.17□□□□□ -1.58
SOX1O00570 Y_RNA.485-201ENST00000384395 102 ntBASIC5.17□□□□□ -1.58
SOX1O00570 Y_RNA.512-201ENST00000384518 102 ntBASIC5.17□□□□□ -1.58
SOX1O00570 MIR548I3-201ENST00000408378 149 ntBASIC5.17□□□□□ -1.58
SOX1O00570 MIR548I1-201ENST00000408810 149 ntBASIC5.17□□□□□ -1.58
SOX1O00570 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.17□□□□□ -1.58
SOX1O00570 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX1O00570 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.17□□□□□ -1.58
SOX1O00570 AL591704.1-201ENST00000432574 275 ntBASIC5.17□□□□□ -1.58
SOX1O00570 AL359672.1-201ENST00000442302 409 ntBASIC5.17□□□□□ -1.58
SOX1O00570 AC002553.2-201ENST00000453217 340 ntBASIC5.17□□□□□ -1.58
SOX1O00570 AC008481.1-201ENST00000463278 396 ntBASIC5.17□□□□□ -1.58
SOX1O00570 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.17□□□□□ -1.58
SOX1O00570 AC090686.1-201ENST00000481577 749 ntBASIC5.17□□□□□ -1.58
SOX1O00570 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX1O00570 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.17□□□□□ -1.58
SOX1O00570 RNU6-120P-201ENST00000516077 103 ntBASIC5.17□□□□□ -1.58
SOX1O00570 RNU4-77P-201ENST00000516692 156 ntBASIC5.17□□□□□ -1.58
SOX1O00570 AC103783.1-201ENST00000520506 373 ntBASIC5.17□□□□□ -1.58
SOX1O00570 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX1O00570 CR383656.7-201ENST00000548164 174 ntBASIC5.17□□□□□ -1.58
SOX1O00570 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX1O00570 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX1O00570 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX1O00570 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX1O00570 AL161423.1-201ENST00000613700 262 ntBASIC5.17□□□□□ -1.58
SOX1O00570 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.17□□□□□ -1.58
SOX1O00570 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX1O00570 AC000095.2-202ENST00000637415 154 ntBASIC5.17□□□□□ -1.58
SOX1O00570 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.17□□□□□ -1.58
SOX1O00570 AP005432.1-201ENST00000580891 3485 ntBASIC5.17□□□□□ -1.58
SOX1O00570 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SOX1O00570 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms