Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.5□□□□□ -2.17
CNOT1A5YKK6 AC243773.3-201ENST00000613270 256 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.5□□□□□ -2.17
CNOT1A5YKK6 Y_RNA.115-201ENST00000363272 98 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 RNU1-22P-201ENST00000363334 158 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 RNU6-225P-201ENST00000384613 103 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 RN7SKP101-201ENST00000411376 320 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 EBAG9P1-201ENST00000418955 543 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 RPL30P3-201ENST00000424262 333 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.5□□□□□ -2.17
CNOT1A5YKK6 HMGN2P20-201ENST00000437531 273 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 RPL34P26-201ENST00000445636 354 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 AC027673.1-201ENST00000456245 405 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 AC098799.2-201ENST00000509466 868 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 Y_RNA.675-201ENST00000516389 149 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 AC036111.3-201ENST00000526389 112 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 AC068135.2-201ENST00000569293 1028 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 RN7SL793P-201ENST00000583259 296 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 AC067838.1-201ENST00000606064 577 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 AC097468.3-201ENST00000607956 456 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 AL592494.3-201ENST00000609485 464 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 AC121761.2-201ENST00000617300 689 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 AC006026.1-201ENST00000444025 1803 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CNOT1A5YKK6 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CNOT1A5YKK6 SNORA67.6-201ENST00000391093 99 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 AL354695.1-201ENST00000427935 228 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.49□□□□□ -2.17
CNOT1A5YKK6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.49□□□□□ -2.17
CNOT1A5YKK6 AC090071.1-201ENST00000507713 644 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.49□□□□□ -2.17
CNOT1A5YKK6 SEPT7P9-203ENST00000604116 343 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 AC006329.2-201ENST00000611491 394 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 AC138649.5-201ENST00000637456 137 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CNOT1A5YKK6 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CNOT1A5YKK6 U8.9-201ENST00000365667 134 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 RNA5SP127-201ENST00000411051 133 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 AL513185.2-201ENST00000425543 193 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 AL590664.1-201ENST00000448065 339 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 HMGB1P26-201ENST00000452520 628 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 AC104308.1-201ENST00000454621 333 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.49□□□□□ -2.17
CNOT1A5YKK6 HMGB1P47-201ENST00000511281 589 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.49□□□□□ -2.17
CNOT1A5YKK6 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CNOT1A5YKK6 AC091895.1-201ENST00000624494 256 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 AP000553.5-201ENST00000641933 54 ntBASIC1.49□□□□□ -2.17
CNOT1A5YKK6 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.48□□□□□ -2.17
CNOT1A5YKK6 NUP58P1-201ENST00000502546 1738 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 ZNF271P-202ENST00000465539 1970 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 VTRNA1-1-201ENST00000363120 99 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 BX510359.4-201ENST00000423750 193 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 VN1R108P-201ENST00000431580 830 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 AC005297.2-201ENST00000450430 606 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.48□□□□□ -2.17
CNOT1A5YKK6 MIR4474-201ENST00000579189 78 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 DUXAP3-201ENST00000603616 594 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 AL590095.2-201ENST00000604136 117 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
CNOT1A5YKK6 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.48□□□□□ -2.17
CNOT1A5YKK6 PABPC1P9-201ENST00000426076 1612 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 HMGN2P35-201ENST00000412164 270 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.48□□□□□ -2.17
CNOT1A5YKK6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.48□□□□□ -2.17
CNOT1A5YKK6 RPL23AP7-203ENST00000449021 469 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 AL583843.1-201ENST00000456070 346 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 RNU6-717P-201ENST00000459076 104 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.48□□□□□ -2.17
CNOT1A5YKK6 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.48□□□□□ -2.17
CNOT1A5YKK6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.48□□□□□ -2.17
CNOT1A5YKK6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
CNOT1A5YKK6 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CNOT1A5YKK6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CNOT1A5YKK6 MTCO1P6-201ENST00000481192 1384 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 DDX43P2-201ENST00000604753 1354 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 MCTS2P-201ENST00000394552 546 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
CNOT1A5YKK6 AL445305.1-201ENST00000432577 575 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 XKRYP6-201ENST00000440468 1116 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 XKRYP3-201ENST00000442113 1116 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.47□□□□□ -2.17
CNOT1A5YKK6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.47□□□□□ -2.17
CNOT1A5YKK6 USP9YP10-201ENST00000454868 628 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 AC010683.1-201ENST00000473673 378 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.47□□□□□ -2.17
CNOT1A5YKK6 RPPH1-2P-201ENST00000516688 293 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 MIR5000-201ENST00000577717 103 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 AC090970.3-201ENST00000612566 866 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 AC034102.8-201ENST00000615146 484 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 AC092159.4-201ENST00000624944 550 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 ZNF33CP-201ENST00000432492 2030 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 AL136520.1-201ENST00000600311 1322 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CNOT1A5YKK6 MTCYBP45-201ENST00000435243 565 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 AL021397.1-201ENST00000451806 248 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.47□□□□□ -2.17
CNOT1A5YKK6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CNOT1A5YKK6 FABP5P6-201ENST00000510588 409 ntBASIC1.47□□□□□ -2.17
CNOT1A5YKK6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms