Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 PSMA6P3-201ENST00000428242 164 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AL592447.1-201ENST00000447592 540 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC011753.1-201ENST00000451001 220 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 snoU13.28-201ENST00000459235 104 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 RPL23AP45-201ENST00000476406 468 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 RBM43P1-201ENST00000476891 1081 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC147055.4-201ENST00000504399 745 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 OR5BM1P-201ENST00000512021 366 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC026616.1-201ENST00000523157 525 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 DEFB108D-201ENST00000527787 222 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 CR383656.7-201ENST00000548164 174 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC090502.2-201ENST00000549267 280 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 GTF3AP2-201ENST00000557014 266 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 RPL23AP84-201ENST00000571193 464 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 ISCA1P3-201ENST00000577104 373 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC015688.2-201ENST00000584523 262 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AL031176.1-201ENST00000604554 466 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AL033523.1-201ENST00000605153 153 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC012467.1-201ENST00000607740 256 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC079597.1-201ENST00000624306 508 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 TPTE2P4-201ENST00000258589 1605 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 OR4G11P-202ENST00000642116 1414 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 MTND4P1-201ENST00000457501 1466 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 SNORA51.11-201ENST00000384442 131 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 RNU6-932P-201ENST00000391108 106 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 RNU6-193P-201ENST00000410977 107 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC092634.6-201ENST00000418558 192 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC234781.2-201ENST00000426370 994 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 RPL7L1P10-201ENST00000427790 463 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 ARPC3P1-201ENST00000437218 533 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC105272.1-201ENST00000438604 198 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AL121871.1-201ENST00000443413 436 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 MRPL42P6-201ENST00000486397 371 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC091860.1-201ENST00000505723 432 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC112518.2-201ENST00000508565 425 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC034159.1-201ENST00000513885 583 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC027309.2-201ENST00000520566 192 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 SETP7-201ENST00000552169 453 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 LARP7P2-201ENST00000575306 125 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 MIR4789-201ENST00000577469 82 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AP002906.1-201ENST00000603405 233 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC006023.1-201ENST00000603944 259 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC092954.1-201ENST00000609121 445 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC245517.5-201ENST00000611529 162 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC034102.8-201ENST00000615146 484 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AC005858.4-201ENST00000623191 700 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 AL118508.4-201ENST00000624142 1176 ntBASIC2.34□□□□□ -2.03
USH1CQ9Y6N9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
USH1CQ9Y6N9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH1CQ9Y6N9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH1CQ9Y6N9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms