Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC005344.1-201ENST00000613391 459 ntBASIC5.33□□□□□ -1.56
PCDHGC4Q9Y5F7 AL031601.2-202ENST00000622650 282 ntBASIC5.33□□□□□ -1.56
PCDHGC4Q9Y5F7 FP236240.3-201ENST00000623061 327 ntBASIC5.33□□□□□ -1.56
PCDHGC4Q9Y5F7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGC4Q9Y5F7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PCDHGC4Q9Y5F7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHGC4Q9Y5F7 AP000560.1-201ENST00000624150 1937 ntBASIC5.33□□□□□ -1.56
PCDHGC4Q9Y5F7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AC092747.4-201ENST00000620519 1861 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AC000374.1-201ENST00000434698 1745 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 RNU6-1266P-201ENST00000362794 105 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 RNU6-14P-201ENST00000384630 106 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 MIR937-201ENST00000401271 86 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 RPL31P2-201ENST00000413849 377 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 RPS15AP6-201ENST00000420703 385 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 RPL7AP49-201ENST00000429522 581 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AL591438.1-201ENST00000433508 581 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AL163193.1-201ENST00000444895 788 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 RPL29P29-201ENST00000448725 423 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 Z92846.1-201ENST00000456203 268 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 RNU7-120P-201ENST00000459334 63 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 HMGN2P13-201ENST00000476476 274 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 Y_RNA.713-201ENST00000517013 96 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AC103783.1-201ENST00000520506 373 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 HIGD1AP5-201ENST00000529959 259 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 CBX3P4-201ENST00000538909 354 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 MIR5692A1-201ENST00000580523 69 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AL034351.1-201ENST00000605288 668 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AC123768.4-201ENST00000616244 701 ntBASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PCDHGC4Q9Y5F7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 BTBD10P1-201ENST00000549824 1352 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 RNU6-933P-201ENST00000384424 107 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 MIR223-201ENST00000385204 110 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 MRPL35P1-201ENST00000404272 572 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 DUTP5-201ENST00000406790 469 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 Y_RNA.592-201ENST00000410274 109 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 GPS2P1-201ENST00000411761 986 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AL451074.5-201ENST00000415894 435 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AC099677.1-201ENST00000420575 175 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AL354766.1-201ENST00000423396 542 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 DNAJC19P7-201ENST00000428811 344 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 RPL19P16-201ENST00000433839 588 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AC090804.1-201ENST00000448870 490 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AC108161.1-201ENST00000461060 402 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AP000797.2-201ENST00000475768 606 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AC022133.1-201ENST00000490961 571 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 MTND3P25-201ENST00000509243 135 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 RNA5SP34-201ENST00000516887 130 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AC087441.2-201ENST00000529141 262 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AC004024.1-201ENST00000549244 247 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 AC126915.2-201ENST00000610957 190 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 Z75746.1-201ENST00000440243 2080 ntBASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGC4Q9Y5F7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms