Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC091953.5-201ENST00000622919 233 ntBASIC2.59□□□□□ -1.99
TRAPPC4Q9Y296 AL356585.4-201ENST00000623078 1229 ntBASIC2.59□□□□□ -1.99
TRAPPC4Q9Y296 AC090617.7-201ENST00000623952 126 ntBASIC2.59□□□□□ -1.99
TRAPPC4Q9Y296 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -2
TRAPPC4Q9Y296 AP000776.1-201ENST00000530032 1663 ntBASIC2.59□□□□□ -2
TRAPPC4Q9Y296 AC080100.1-201ENST00000624239 5356 ntBASIC2.59□□□□□ -2
TRAPPC4Q9Y296 OR4G11P-202ENST00000642116 1414 ntBASIC2.59□□□□□ -2
TRAPPC4Q9Y296 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 RNU6-1074P-201ENST00000383995 104 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 MIR512-1-201ENST00000384913 84 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 SNORA11.1-201ENST00000408133 129 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 MTATP6P27-201ENST00000416987 621 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 NANOGNBP1-201ENST00000448444 480 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AL353691.1-201ENST00000451332 387 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC027673.1-201ENST00000456245 405 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 USP9YP25-201ENST00000457708 443 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 RNU7-136P-201ENST00000458819 69 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC111000.2-201ENST00000507775 550 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 KLHL2P1-201ENST00000508691 521 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 SNORA31.1-201ENST00000515993 133 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 SNORA31.5-201ENST00000516190 133 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 SNORA9.3-201ENST00000516383 129 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC090136.1-201ENST00000520009 240 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC022861.1-201ENST00000522981 663 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 OR5AK1P-201ENST00000524837 922 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 MTCO2P15-201ENST00000532655 656 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC024224.1-201ENST00000538284 609 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 MTND4P33-201ENST00000556706 766 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 CYCSP2-201ENST00000558168 301 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC009712.1-201ENST00000564938 316 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC091057.2-201ENST00000602594 792 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AL161756.2-201ENST00000604597 246 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC080013.3-201ENST00000606839 578 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AP000240.1-201ENST00000609910 452 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC004696.1-201ENST00000614345 607 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AL596245.1-201ENST00000618994 362 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AC009039.2-201ENST00000624524 529 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRAPPC4Q9Y296 AL356473.1-201ENST00000406203 1408 ntBASIC2.58□□□□□ -2
TRAPPC4Q9Y296 VTRNA1-1-201ENST00000363120 99 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 SNORA14A-201ENST00000364773 135 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 CD24P4-201ENST00000382840 243 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 SNORD21-201ENST00000383953 95 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 SNORA44-201ENST00000384584 132 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 MIR1284-201ENST00000408337 120 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 MTCO2P5-201ENST00000422621 426 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AL139421.1-201ENST00000423010 169 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 USP9YP36-201ENST00000424581 829 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC079780.1-201ENST00000428259 207 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC109583.1-201ENST00000432156 268 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 CR769776.1-201ENST00000441254 787 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 SNORD11.1-201ENST00000459482 85 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC023424.2-201ENST00000493479 777 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC020699.1-201ENST00000505161 445 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC104090.1-201ENST00000506341 1171 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC010587.2-201ENST00000511727 448 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 RNU6-311P-201ENST00000516224 102 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC025881.1-201ENST00000518851 512 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 HPRT1P3-201ENST00000539521 576 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 COX6CP3-201ENST00000580869 223 ntBASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.57□□□□□ -2
TRAPPC4Q9Y296 AC245297.2-201ENST00000610119 565 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms